Haemophilus influenzae Hi394 |
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Putative Haemophilus influenzae Hi394 RM systems
Ref: Giufre,M. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19562
Contig set: 1,896,215 bp
GenBank #: JXMD00000000 (NZ_JXMD00000000)
REBASE acronym: Hin394
Org_num: 15675
All begin SU55_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 525 | membrane protein | |||
| 530 | R | HinP3EMOORF7185P (100% identity) | Hin394ORF550P | |
| 535 | 2-hydroxyacid dehydrogenase | |||
| 540 | anticodon nuclease | |||
| 545 | S | S.HinP3EMOORF7185P (100% identity) | S.Hin394ORF550P | |
| 550 | M | M.HinP3EMOORF7185P (100% identity) | M.Hin394ORF550P | |
| 555 | oligopeptidase A | |||
| 3105 | signal recognition particle | |||
| 3110 | R | HinII3ORF8910P (100% identity) | Hin394ORF3125P | |
| 3115 | S | S.HinP3EMOORF6585P (100% identity) | S.Hin394ORF3125P | |
| 3120 | ATPase | |||
| 3125 | M | M.HinP3EMOORF6585P (100% identity) | M.Hin394ORF3125P | |
| 3130 | metal-binding protein | |||
| 9325 | ribosome-binding factor A | |||
| ??? | M | M.Hin4396ORF6785P (100% identity) | M.Hin394ORF9330P | |
| 9335 | S | S.HinP3EMOORF3665P (100% identity) | S.Hin394ORF9330P | |
| 9340 | 212 aa hypothetical protein | |||
| 9345 | R | HinP3EMOORF3665P (100% identity) | Hin394ORF9330P | |
| 9350 | translation initiation factor IF-2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7415 | 217 aa hypothetical protein | |||
| 7420 | M | M.Hin403ORF1070P (99% identity) | M.Hin394ORF7420P | |
| 7425 | 119 aa hypothetical protein | |||
| 2870 | DNA-binding protein | |||
| 2875 | M | M.HinP3EMOORF4195P (100% identity) | GTCGAC | M.Hin394ORF2875P |
| 2880 | R | R2.HinP3EMOORF4195P (100% identity) | GTCGAC | Hin394ORF2875P |
| 2885 | 364 aa hypothetical protein | |||
| 5335 | 114 aa hypothetical protein | |||
| 5340 | M | M.HinY40ORF16330P (100% identity) | M.Hin394ORF5340P | |
| 5345 | endonuclease | |||
| 8990 | valyl-tRNA synthetase | |||
| 8995 | R | HinIII8ORF12360P (100% identity) | AAGCTT | Hin394ORF9000P |
| 9000 | M | M.HinIII8ORF12360P (100% identity) | AAGCTT | M.Hin394ORF9000P |
| 9005 | valine--tRNA ligase | |||
| 9105 | condesin subunit E | |||
| 9110 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin394ORF9115P |
| 9115 | M | M.Hin4396ORF7005P (100% identity) | RGCGCY | M.Hin394ORF9115P |
| 9120 | condesin subunit F | |||
| 7045 | Mu-like prophage FluMu protein com | |||
| 7050 | M | M.HinV1ORF4250P (100% identity) | BA | M.Hin394ORF7050P |
| 7055 | 87 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2295 | ribonuclease HII | |||
| 2300 | M | M.HinII3ORF16980P (100% identity) | M.Hin394ORF2300P | |
| 2305 | R | HinII7ORF17560P (100% identity) | Hin394ORF2300P | |
| 2310 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 575 | phosphatidylglycerophosphatase | |||
| 580 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin394ORF580P |
| 585 | 3-dehydroquinate synthase | |||