Pedobacter species NL19 |
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Putative Pedobacter species NL19 RM systems
Ref: Santos,T. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19556
Contig set: 5,988,187 bp
GenBank #: JXRA00000000 (NZ_JXRA00000000)
REBASE acronym: PspNL19
Org_num: 15683
All begin TH53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23875 | pseudogene | |||
| 23880 | R | DbaSRB1ORF941P (82% identity) | PspNL19ORF23900P | |
| 23885 | 137 aa hypothetical protein | |||
| 23890 | 651 aa hypothetical protein | |||
| 23895 | S | S.Agi809ORF12195P (37% identity) | S.PspNL19ORF23900P | |
| 23900 | M | M.DbaSRB1ORF941P (78% identity) | M.PspNL19ORF23900P | |
| 23905 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19890 | 79 aa hypothetical protein | |||
| 19895 | M | M.PspHDW13ORF18065P (69% identity) | GCNNGC | M.PspNL19ORF19895P |
| 19900 | 65 aa hypothetical protein | |||
| 16685 | 187 aa hypothetical protein | |||
| 16690 | V | V.Pcr27485ORF2002P (73% identity) | V.PspNL19ORF16695P | |
| 16695 | M | M.Pcr27485ORF2002P (93% identity) | CCWGG | M.PspNL19ORF16695P |
| 16700 | R | Pcr27485ORF2002P (85% identity) | CCWGG | PspNL19ORF16695P |
| 16705 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8740 | 194 aa hypothetical protein | |||
| 8745 | R | Fsp76McrBP (33% identity) | PspNL19McrBP | |
| 8750 | R | Ssa12974McrCP (46% identity) | PspNL19McrCP | |
| 8755 | 131 aa hypothetical protein | |||