Shigella sonnei CFSAN030807 |
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Putative Shigella sonnei CFSAN030807 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 19644
Complete sequence: 4,717,442 bp
GenBank #: CP011422
REBASE acronym: Sso30807
Org_num: 15540
All begin AA103_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7330 | pseudogene | |||
| 7335 | S | S.Sdy9754I (100% identity) | GGANNNNNNCTTT | S.Sso30807I |
| 7340 | M | M.Sdy9764I (100% identity) | GGANNNNNNCTTT | M.Sso30807I |
| 7345 | R | Sdy96265IP (100% identity) | GGANNNNNNCTTT | Sso30807IP |
| 7350 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1460 | Fis family transcriptional regulator | |||
| 1465 | M | M.Sdy9751ORFLP (95% identity) | ATGCAT | M.Sso30807ORF1465P |
| 1470 | 59 aa hypothetical protein | |||
| 2060 | ribulose-phosphate 3-epimerase | |||
| 2065 | M | M.Sdy9754DamP (100% identity) | GATC | M.Sso30807DamP |
| 2070 | cell division protein DamX | |||
| 9360 | 162 aa hypothetical protein | |||
| 9365 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sso30807ORF9365P |
| 9370 | LexA family transcriptional regulator | |||
| 12360 | transposase | |||
| 12365 | M | M.Sdy9753ORFJP (100% identity) | GATC | M.Sso30807ORF12365P |
| 12370 | pseudogene | |||
| 15400 | TrmB family transcriptional regulator | |||
| 15405 | M | M.Sdy9753ORFFP (100% identity) | M.Sso30807ORF15405P | |
| 15420 | membrane protein | |||
| 19335 | 129 aa hypothetical protein CSW72_22935 | |||
| 19340 | M | M.Sdy9764ORFGP (89% identity) | GATC | M.Sso30807ORF19320P |
| 19345 | 162 aa hypothetical protein | |||
| 19900 | multidrug DMT transporter | |||
| 19905 | V | V.SsoST152DcmP (100% identity) | CCWGG | V.Sso30807DcmP |
| 19910 | M | M.Sdy9754DcmP (100% identity) | CCWGG | M.Sso30807Dcm |
| 19915 | hydrolase | |||
| 21235 | 77 aa hypothetical protein | |||
| 21255 | M | M.Sdy9751ORFDP (100% identity) | A | M.Sso30807ORF21255P |
| 21260 | TrmB family transcriptional regulator | |||