Rhizobium species YS-1r |
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Putative Rhizobium species YS-1r RM systems
Ref: Prabhakaran,M. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19341
Contig set: 6,382,375 bp
GenBank #: JPYQ00000000 (NZ_JPYQ00000000)
REBASE acronym: RspYS1r
Org_num: 15243
All begin JL39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19770 | restriction endonuclease | |||
| 19775 | R | AtuTul004ORF18315P (91% identity) | RspYS1rORF19790P | |
| 19780 | 179 aa hypothetical protein | |||
| 19785 | S | S.Ead53II (34% identity) | S.RspYS1rORF19790P | |
| 19790 | M | M.AspB76ORF18045P (93% identity) | M.RspYS1rORF19790P | |
| 19795 | 222 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26570 | LysR family transcriptional regulator | |||
| ??? | RM | Ssp58ORF4206P (67% identity) | RspYS1rORF26575P | |
| 26580 | molecular chaperone Hsp70 | |||
| 14155 | 132 aa hypothetical protein | |||
| ??? | M | M.Rle303ORF7990P (94% identity) | GCCGGC | M.RspYS1rORFAP |
| 14170 | 344 aa hypothetical protein | |||
| 7680 | 311 aa hypothetical protein | |||
| 7685 | M | M.Rga1141ORF24340P (84% identity) | M.RspYS1rORF7685P | |
| 7695 | 235 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19765 | DNA resolvase | |||
| 19770 | R | Rsp2MrrP (93% identity) | RspYS1rMrrP | |
| 19775 | restriction endonuclease subunit R | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27870 | 2-haloalkanoic acid dehalogenase | |||
| 27875 | M | M.NpeOS53ORF3045P (99% identity) | GANTC | M.RspYS1rORF27875P |
| 27880 | DNA polymerase III subunit beta | |||