Mannheimia haemolytica D38 |
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Putative Mannheimia haemolytica D38 RM systems
Ref: Hauglund,M.J. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19320
Contig set: 2,611,675 bp
GenBank #: AUNL00000000 (NZ_AUNL00000000)
REBASE acronym: MhaD38
Org_num: 15225
All begin L279_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | S | S2.Mhas184ORF2820P (100% identity) | S1.MhaD38ORF2060P | |
| 2065 | S | S.Pba12565ORF10250P (100% identity) | S2.MhaD38ORF2060P | |
| 2070 | 667 aa hypothetical protein | |||
| 2065 | 452 aa hypothetical protein | |||
| 2070 | M | M.Pba12565ORF10250P (100% identity) | M.MhaD38ORF2070P | |
| 2075 | B12-dependent methionine synthase | |||
| 955 | phosphatidylserine decarboxylase | |||
| 960 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | MhaD38ORF965P |
| 965 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNRTTG | M.MhaD38ORF965P |
| 970 | transcriptional regulator | |||
| 975 | 55 aa hypothetical protein | |||
| 980 | S | S1.Mhas183ORF2125P (100% identity) | GNGAYNNNNNNNRTTG | S1.MhaD38ORF965P |
| 985 | integrase | |||
| ??? | S | S2.MhaH23ORF152P (100% identity) | S2.MhaD38ORF965P | |
| 995 | glutamate--cysteine ligase | |||
| 11740 | glutamine-synthetase adenylyltransferase | |||
| 11745 | R | Mhas183ORF4955P (100% identity) | GAANNNNNGTC | MhaD38ORF11755P |
| 11750 | S | S.PhaAI (100% identity) | GACNNNNNTTC | S.MhaD38ORF11755P |
| 11755 | M | M.Mhas183ORF4955P (95% identity) | GAANNNNNGTC | M.MhaD38ORF11755P |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13385 | 101 aa hypothetical protein | |||
| 13390 | R | Pba12565ORF8745P (100% identity) | GCATC | MhaD38ORF13395P |
| 13395 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.MhaD38ORF13395P |
| 13400 | 61 aa hypothetical protein | |||
| 13255 | 41 aa hypothetical protein | |||
| 13260 | M | M.Pba12565ORF4290P (100% identity) | GATC | M.MhaD38ORF13260P |
| 13265 | 348 aa hypothetical protein | |||
| 9510 | DNA helicase | |||
| 9515 | M | M.Pba12565ORF7080P (100% identity) | GATC | M.MhaD38ORF9515P |
| 9520 | 168 aa hypothetical protein | |||
| 7205 | 342 aa hypothetical protein | |||
| 7215 | M | M.Pba12565ORF4970P (100% identity) | GATC | M.MhaD38ORF7215P |
| 7220 | 211 aa hypothetical protein | |||
| 2180 | 812 aa hypothetical protein | |||
| 2185 | M | M.Pba12565ORF10370P (100% identity) | BA | M.MhaD38ORF2185P |
| 2190 | 51 aa hypothetical protein | |||
| 7355 | 41 aa hypothetical protein | |||
| 7360 | M | M.Pba12565ORF6605P (100% identity) | BA | M.MhaD38ORF7360P |
| 7365 | methyltransferase | |||
| 7360 | 280 aa hypothetical protein | |||
| 7365 | M | M.Pba12565ORF6600P (100% identity) | M.MhaD38ORF7365P | |
| 7370 | 91 aa hypothetical protein | |||
| 3655 | 3-dehydroquinate synthase | |||
| 3660 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.MhaD38ORF3660P |
| 3665 | transporter | |||
| 4140 | helicase IV | |||
| ??? | RM | MhaPORFCP (100% identity) | MhaD38ORF4145P | |
| 4150 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.MhaD38ORF4145P |
| 4155 | 183 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11240 | M | M.Mhas183ORF5480P (96% identity) | GTTAAT | M.MhaD38ORF11240P |
| 11245 | R | Pba12565ORF6755P (100% identity) | GTTAAT | MhaD38ORF11240P |
| 11250 | DNA gyrase subunit B | |||
| 9035 | trimethylamine N-oxide reductase I catalytic | |||
| ??? | M | M.Mha0746ORF10750P (97% identity) | M.MhaD38ORF9040P | |
| ??? | R | MhaD174ORFAP (100% identity) | MhaD38ORF9040P | |
| 9060 | type II citrate synthase | |||