Methylomonas species LW13 |
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Putative Methylomonas species LW13 RM systems
Ref: Kalyuzhnaya,M.G. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19297
| Sequence length: | GenBank #: | |
| Chromosome: | 5,200,804 bp | JNLB00000000 (NZ_JNLB00000000) |
| Chromosome: | 5,233,523 bp | CP033381 |
REBASE acronym: MspLW13
Org_num: 15232
All begin U737_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.MspLW13ORF6780P (100% identity) | M.MspLW13ORFIP | |
| ??? | S | S.MspEFPC1ORF6010P (57% identity) | S.MspLW13ORFIP | |
| ??? | R | MspEFPC1ORF6010P (98% identity) | MspLW13ORFIP | |
| ??? | M | M.MspLW13ORF13710P (100% identity) | M.MspLW13ORFLP | |
| ??? | S | S.MspLW13ORF13710P (100% identity) | S.MspLW13ORFLP | |
| ??? | S | S.MspLW13ORF2995P (100% identity) | S.MspLW13ORFGP | |
| ??? | M | M.MspLW13ORF2995P (87% identity) | M.MspLW13ORFGP | |
| ??? | R | MspLW13ORF2995P (98% identity) | MspLW13ORFGP | |
| ??? | R | MspLW13ORF6420P (100% identity) | MspLW13ORFHP | |
| ??? | M | M.MspLW13ORF6420P (100% identity) | M.MspLW13ORFHP | |
| ??? | S | S2.MspLW13ORF6420P (100% identity) | S.MspLW13ORFHP | |
| ??? | M | M.MspLW13ORF3770P (100% identity) | M.MspLW13ORFCP | |
| ??? | S | S.MspLW13ORF3770P (100% identity) | S.MspLW13ORFCP | |
| ??? | R | MspLW13ORF3770P (96% identity) | MspLW13ORFCP | |
| ??? | S | S.MspLW13ORF17940P (96% identity) | S.MspLW13ORFBP | |
| ??? | M | M.MspLW13ORF17940P (94% identity) | M.MspLW13ORFBP | |
| ??? | R | MspLW13ORF17940P (100% identity) | MspLW13ORFBP | |
| Chromosome | ||||
| 2985 | 620 aa hypothetical protein | |||
| 2990 | S | S.MspLW13ORFGP (100% identity) | S.MspLW13ORF2995P | |
| 2995 | M | M.MspLW13ORFGP (87% identity) | M.MspLW13ORF2995P | |
| 3000 | R | MspLW13ORFGP (98% identity) | MspLW13ORF2995P | |
| 3005 | recombinase family protein | |||
| 3765 | 128 aa hypothetical protein | |||
| 3770 | M | M.MspLW13ORFCP (100% identity) | M.MspLW13ORF3770P | |
| 3775 | transposase | |||
| 3780 | 68 aa hypothetical protein | |||
| 3785 | S | S.MspLW13ORFCP (100% identity) | S.MspLW13ORF3770P | |
| 3790 | 78 aa hypothetical protein | |||
| 3795 | Fic family protein | |||
| 3800 | R | MspLW13ORFCP (96% identity) | MspLW13ORF3770P | |
| 3805 | M48 family peptidase | |||
| 6405 | 159 aa hypothetical protein | |||
| 6410 | S | S.MspLW13ORFHP (100% identity) | S2.MspLW13ORF6420P | |
| 6415 | DUF1016 domain-containing protein | |||
| 6420 | M | M.MspLW13ORFHP (100% identity) | M.MspLW13ORF6420P | |
| 6425 | R | MspLW13ORFHP (100% identity) | MspLW13ORF6420P | |
| 6430 | HU family DNA-binding protein | |||
| 6775 | type II toxin-antitoxin system VapC family | |||
| 6780 | M | M.MspLW13ORFIP (100% identity) | M.MspLW13ORF6780P | |
| 6785 | 62 aa hypothetical protein | |||
| 13705 | Uma2 family endonuclease | |||
| ??? | M | M.MspLW13ORFLP (100% identity) | M.MspLW13ORF13710P | |
| 13715 | S | S.MspLW13ORFLP (100% identity) | S.MspLW13ORF13710P | |
| 13720 | 190 aa hypothetical protein | |||
| 17915 | ComC/BlpC family peptide pheromone/bacteriocin | |||
| 17920 | S | S.MspLW13ORFBP (96% identity) | S.MspLW13ORF17940P | |
| 17925 | DUF2442 domain-containing protein | |||
| 17930 | DUF4160 domain-containing protein | |||
| 17935 | DUF1016 family protein | |||
| 17940 | M | M.MspLW13ORFBP (94% identity) | M.MspLW13ORF17940P | |
| 17945 | R | MspLW13ORFBP (100% identity) | MspLW13ORF17940P | |
| 17950 | 77 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | 653 aa hypothetical protein | |||
| ??? | RM | MspLW13ORF3265P (100% identity) | MspLW13ORFDP | |
| ??? | DNA mismatch repair protein | |||
| ??? | 1454 aa hypothetical protein, partial | |||
| ??? | V | V.MspLW13ORF3280P (89% identity) | V.MspLW13ORFEP | |
| ??? | M | M.MspLW13ORF3280P (100% identity) | M.MspLW13ORFEP | |
| ??? | RM | MspLW13ORF18000P (99% identity) | MspLW13ORFAP | |
| Chromosome | ||||
| 3260 | ATP-binding protein | |||
| 3265 | RM | MspLW13ORFDP (100% identity) | MspLW13ORF3265P | |
| 3270 | helicase | |||
| 3270 | helicase | |||
| 3275 | V | V.MspLW13ORFEP (89% identity) | V.MspLW13ORF3280P | |
| ??? | M | M.MspLW13ORFEP (100% identity) | M.MspLW13ORF3280P | |
| 3285 | 66 aa hypothetical protein | |||
| 17995 | 99 aa hypothetical protein | |||
| 18000 | RM | MspLW13ORFAP (99% identity) | MspLW13ORF18000P | |
| 18005 | 298 aa hypothetical protein | |||
| 19385 | 548 aa hypothetical protein | |||
| 19390 | R | LcaXL2ORF8675P (81% identity) | MspLW13ORF19395P | |
| 19395 | M | M.LcaXL2ORF8675P (80% identity) | M.MspLW13ORF19395P | |
| 19400 | efflux RND transporter periplasmic adaptor | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | MspLW13ORF18875P (100% identity) | MspLW13ORFMP | |
| ??? | M | M.MspLW13ORF18875P (100% identity) | M.MspLW13ORFMP | |
| Chromosome | ||||
| 18855 | phage Gp37/Gp68 family protein | |||
| 18860 | R | MspLW13ORFMP (100% identity) | MspLW13ORF18875P | |
| 18865 | DUF86 domain-containing protein | |||
| 18870 | DNA polymerase subunit beta | |||
| 18875 | M | M.MspLW13ORFMP (100% identity) | M.MspLW13ORF18875P | |
| 18880 | 773 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | R | Pme10692Mrr2P (71% identity) | MspLW13MrrP | |