Methanosarcina mazei C16 |
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Putative Methanosarcina mazei C16 RM systems
Ref: Henriksen,J.R. et al. unpublished
REBASE ref # 19423
Complete sequence: 4,166,241 bp
GenBank #: CP009514
REBASE acronym: Mma16
Org_num: 15333
All begin MSMAC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 860 | Transcriptional regulator, TetR family | |||
| 861 | R | Mma610ORF863P (98% identity) | Mma16ORF863P | |
| 862 | S | S.Mva761ORF2158P (61% identity) | S.Mma16ORF863P | |
| 863 | M | M.MmaLYCORF882P (99% identity) | M.Mma16ORF863P | |
| 864 | exonuclease, DNA ligase-associated | |||
| 1110 | peptidase, M48 family | |||
| 1111 | S | Type I restriction-modification system, | S1.Mma16ORF1113P | |
| 1112 | S | S.MmaS6ORF2003P (76% identity) | S2.Mma16ORF1113P | |
| 1113 | M | M.MmaS6ORF2003P (100% identity) | M.Mma16ORF1113P | |
| 1114 | R | Mma610ORF1928P (100% identity) | Mma16ORF1113P | |
| 1115 | 108 aa hypothetical protein | |||
| 1142 | 207 aa hypothetical protein | |||
| 1143 | R | MmaTMAORF6940P (100% identity) | Mma16ORF1149P | |
| 1144 | 100 aa hypothetical protein | |||
| 1145 | 190 aa hypothetical protein | |||
| 1146 | 197 aa hypothetical protein | |||
| 1147 | 171 aa hypothetical protein | |||
| 1148 | S | S.MmaTMAORF6940P (100% identity) | S.Mma16ORF1149P | |
| 1149 | M | M.MmaTMAORF6940P (100% identity) | M.Mma16ORF1149P | |
| 1150 | 330 aa hypothetical protein | |||
| 1430 | Mg/Co/Ni transporter MgtE | |||
| 1431 | R | MmaTMAORF27060P (99% identity) | Mma16ORF1434P | |
| 1432 | 66 aa hypothetical protein | |||
| 1433 | S | S.MmaLYCORF2134P (67% identity) | S.Mma16ORF1434P | |
| 1434 | M | M.MmaTMAORF27060P (100% identity) | M.Mma16ORF1434P | |
| 1435 | cell surface protein | |||
| 1951 | 265 aa hypothetical protein | |||
| 1952 | M | M.Mma610ORF2444P (98% identity) | M.Mma16ORF1952P | |
| 1953 | S | S.Mma610ORF2444P (100% identity) | S.Mma16ORF1952P | |
| 1954 | DNA-binding protein in cluster with | |||
| 1955 | R | MmaJL01ORF3245P (100% identity) | Mma16ORF1952P | |
| 1956 | Ribose-phosphate pyrophosphokinase | |||
| 2882 | Exodeoxyribonuclease III | |||
| 2883 | M | M.Mmazm15ORF8325P (100% identity) | M.Mma16ORF2883P | |
| 2884 | 776 aa hypothetical protein | |||
| 2885 | 74 aa hypothetical protein | |||
| 2886 | 93 aa hypothetical protein | |||
| 2887 | Mobile element protein | |||
| 2888 | TPR-domain containing protein | |||
| 2889 | 277 aa hypothetical protein | |||
| 2890 | 72 aa hypothetical protein | |||
| 2891 | S | S.MmaTMAORF16670P (100% identity) | S.Mma16ORF2883P | |
| 2892 | R | MmaJL01ORF5200P (100% identity) | Mma16ORF2883P | |
| 2893 | Flavodoxin | |||
| 3050 | 127 aa hypothetical protein | |||
| 3051 | M | M.MmaTMAORF18590P (100% identity) | M.Mma16ORF3051P | |
| 3052 | S | S.MmaTMAORF18590P (100% identity) | S.Mma16ORF3051P | |
| 3053 | 702 aa hypothetical protein | |||
| 3054 | R | MmaTMAORF18590P (100% identity) | Mma16ORF3051P | |
| 3055 | 300 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1944 | 276 aa hypothetical protein | |||
| 1945 | M | M.Fsp2536ORFBP (49% identity) | M.Mma16ORF1945P | |
| 1946 | 1029 aa hypothetical protein | |||
| 1945 | 630 aa hypothetical protein | |||
| 1946 | RM | Pgi11550ORF2105P (57% identity) | Mma16ORF1946P | |
| 1947 | DNA double-strand break repair protein Mre11 | |||
| 2465 | 676 aa hypothetical protein | |||
| 2466 | M | M.MmaTMAORF9160P (98% identity) | CAGCTG | M.Mma16ORF2466P |
| 2467 | 1078 aa hypothetical protein | |||
| 2520 | ATP-dependent DNA helicase | |||
| 2521 | RM | Mmazm15ORF6120P (98% identity) | Mma16ORF2521P | |
| 2522 | 785 aa hypothetical protein | |||
| 2766 | tRNA (guanine(37)-N1)-methyltransferase Trm5a | |||
| 2767 | RM | Mmazm15ORF7525P (99% identity) | Mma16ORF2767P | |
| 2768 | Dihydrolipoamide dehydrogenase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2466 | PvuII DNA methyltransferase | |||
| 2467 | R | MmaTMAORF9190P (65% identity) | Mma16ORF2468P | |
| 2468 | M | M.MmaTMAORF9190P (59% identity) | M.Mma16ORF2468P | |
| 2469 | 236 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 78 | Peptidase M48, Ste24p precursor | |||
| 79 | R | Mmazm15MrrP (100% identity) | Mma16MrrP | |
| 80 | Dihydrofolate reductase | |||
| 2380 | Membrane alanine aminopeptidase N | |||
| 2381 | R | MhoHB1ORF1217P (87% identity) | Mma16ORF2381P | |
| 2382 | 174 aa hypothetical protein | |||
| 2508 | ATP-dependent DNA helicase pcrA | |||
| 2509 | R | MmaS6McrBP (99% identity) | Mma16McrBP | |
| 2510 | R | MmaS6McrCP (99% identity) | Mma16McrCP | |
| 2511 | ATP-dependent protease | |||