Methanosarcina mazei WWM610 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Methanosarcina mazei WWM610 RM systems
Ref: Henriksen,J.R. et al. unpublished
REBASE ref # 19423
Complete sequence: 4,096,482 bp
GenBank #: CP009509
REBASE acronym: Mma610
Org_num: 15329
All begin MSMAW_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 860 | Transcriptional regulator, TetR family | |||
| 861 | R | Mmazm15ORF4470P (99% identity) | Mma610ORF863P | |
| 862 | S | S.Mmazm15ORF4470P (100% identity) | S.Mma610ORF863P | |
| 863 | M | M.Mmazm15ORF4470P (98% identity) | M.Mma610ORF863P | |
| 864 | exonuclease, DNA ligase-associated | |||
| 1085 | 43 aa hypothetical protein | |||
| 1086 | R | MbaMSORF2379P (92% identity) | Mma610ORF1089P | |
| 1087 | 563 aa hypothetical protein | |||
| 1088 | S | S.MbaMSORF2379P (53% identity) | S.Mma610ORF1089P | |
| 1089 | M | M2.MbaMSORF2379P (95% identity) | M2.Mma610ORF1089P | |
| 1090 | M | M1.MbaMSORF2379P (93% identity) | M1.Mma610ORF1089P | |
| 1091 | 115 aa hypothetical protein | |||
| 1487 | Exodeoxyribonuclease III | |||
| 1488 | M | M.Mmazm15ORF8325P (100% identity) | M.Mma610ORF1488P | |
| 1489 | 776 aa hypothetical protein | |||
| 1490 | 74 aa hypothetical protein | |||
| 1491 | 93 aa hypothetical protein | |||
| 1492 | 389 aa hypothetical protein | |||
| 1493 | 72 aa hypothetical protein | |||
| 1494 | Type I restriction-modification system, | |||
| 1495 | S | S.MmaGORF3147P (71% identity) | S.Mma610ORF1488P | |
| 1496 | Type I restriction-modification system, | |||
| 1497 | R | MmaGORF3147P (99% identity) | Mma610ORF1488P | |
| 1498 | Flavodoxin | |||
| 1640 | 127 aa hypothetical protein | |||
| 1641 | M | M.MmaTMAORF18590P (100% identity) | M.Mma610ORF1641P | |
| 1642 | S | S.MmaTMAORF18590P (100% identity) | S.Mma610ORF1641P | |
| 1643 | 702 aa hypothetical protein | |||
| ??? | R | MmaTMAORF18590P (99% identity) | Mma610ORF1641P | |
| 1646 | 300 aa hypothetical protein | |||
| 1926 | 108 aa hypothetical protein | |||
| 1927 | R | Mma16ORF1113P (100% identity) | Mma610ORF1928P | |
| 1928 | M | M.MmaS6ORF2003P (100% identity) | M.Mma610ORF1928P | |
| 1929 | S | S.MmaGORF2704P (100% identity) | S.Mma610ORF1928P | |
| 1930 | 761 aa hypothetical protein | |||
| 2440 | Ribose-phosphate pyrophosphokinase | |||
| 2441 | R | MmaJL01ORF3245P (100% identity) | Mma610ORF2444P | |
| 2442 | DNA-binding protein in cluster with | |||
| 2443 | S | S.Mma16ORF1952P (100% identity) | S.Mma610ORF2444P | |
| 2444 | M | M.Mma16ORF1952P (98% identity) | M.Mma610ORF2444P | |
| 2445 | 265 aa hypothetical protein | |||
| 2919 | 336 aa hypothetical protein | |||
| 2920 | M | M.MmaS6ORF3001P (100% identity) | M.Mma610ORF2920P | |
| 2921 | ATP-dependent DNA helicase RecG | |||
| ??? | S | S.MmaS6ORF3001P (100% identity) | S.Mma610ORF2920P | |
| 2923 | ATPase involved in DNA repair | |||
| 2924 | Mobile element protein | |||
| 2925 | 190 aa hypothetical protein | |||
| 2926 | 165 aa hypothetical protein | |||
| 2927 | 387 aa hypothetical protein | |||
| 2928 | 71 aa hypothetical protein | |||
| 2929 | R | Mmazm15ORF16065P (99% identity) | Mma610ORF2920P | |
| 2930 | Mg/Co/Ni transporter MgtE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1151 | ATP-dependent DNA helicase | |||
| 1152 | RM | Mso21ORFDP (100% identity) | Mma610ORF1152P | |
| 1153 | 785 aa hypothetical protein | |||
| 1378 | tRNA (guanine(37)-N1)-methyltransferase Trm5a | |||
| 1379 | RM | Mmazm15ORF7525P (99% identity) | Mma610ORF1379P | |
| 1380 | Dihydrolipoamide dehydrogenase | |||
| 2239 | ATP-dependent RNA helicase | |||
| 2240 | RM | Mso21ORFEP (55% identity) | Mma610ORF2240P | |
| 2241 | Catalase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | Peptidase M48, Ste24p precursor | |||
| 81 | R | MmaS6MrrP (100% identity) | Mma610MrrP | |
| 82 | Bifunctional deaminase-reductase domain protein | |||