Bifidobacterium bifidum ATCC 29521 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bifidobacterium bifidum ATCC 29521 RM systems
Ref: Toh,H. et al. unpublished
REBASE ref # 19013
Complete sequence: 2,211,039 bp
GenBank #: AP012323
REBASE acronym: Bbi29521
Org_num: 15161
All begin BBBF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 181 | 481 aa conserved hypothetical protein | |||
| 182 | M | M.Bbi8628BORF167P (100% identity) | M.Bbi29521ORF182P | |
| 183 | S | S.Bbi8628BORF167P (100% identity) | S.Bbi29521ORF182P | |
| 184 | 305 aa conserved hypothetical protein | |||
| 185 | R | Bbi8628BORF167P (100% identity) | Bbi29521ORF182P | |
| 186 | 114 aa conserved hypothetical protein | |||
| 1135 | argininosuccinate lyase | |||
| 1136 | R | Bbi13001IP (100% identity) | Bbi29521ORF1139P | |
| 1137 | 518 aa conserved hypothetical protein | |||
| 1138 | S | S4.Bbi13001ORF1104P (100% identity) | S.Bbi29521ORF1139P | |
| 1139 | M | M.Bbi13001I (100% identity) | M.Bbi29521ORF1139P | |
| 1140 | 243 aa conserved hypothetical protein | |||
| 1352 | 46 aa hypothetical protein | |||
| ??? | S | S5.Bbi13001IIIP (100% identity) | S1.Bbi29521ORF1355P | |
| 1353 | phage integrase | |||
| 1354 | S | S2.BlmNCIP (67% identity) | S2.Bbi29521ORF1355P | |
| ??? | S | S1.BloBPORF2330P (100% identity) | S3.Bbi29521ORF1355P | |
| 1355 | M | M.Bbi13001III (100% identity) | M.Bbi29521ORF1355P | |
| 1356 | R | Bbi13001IIIP (97% identity) | Bbi29521ORF1355P | |
| 1357 | isoleucyl-tRNA synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 125 | 65 aa hypothetical protein | |||
| 126 | R | BbiBF3ORF180P (100% identity) | GRCGYC | Bbi29521ORF127P |
| 127 | M | M.Bbi3115ORF1711P (100% identity) | GRCGYC | M.Bbi29521ORF127P |
| 128 | 91 aa hypothetical protein | |||
| 172 | beta-galactosidase | |||
| ??? | R | BbiDORFBP (100% identity) | GGCGCC | Bbi29521ORF173P |
| 175 | transport protein | |||
| 527 | 48 aa hypothetical protein | |||
| 528 | R | BbiS6ORF8015P (100% identity) | Bbi29521ORF528P | |
| 529 | GTP-binding protein | |||
| 784 | transposase | |||
| ??? | M | M.PmeBin303ORFAP (100% identity) | GAATTC | M.Bbi29521ORFAP |
| 787 | 84 aa hypothetical protein | |||
| 860 | 49 aa hypothetical protein | |||
| ??? | RM | Bbi13001ORFAP (99% identity) | Bbi29521ORF861P | |
| 865 | 43 aa hypothetical protein | |||