Haemophilus influenzae NCTC8143 |
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Putative Haemophilus influenzae NCTC8143 RM systems
Ref: Informatics,Pathogen. unpublished
REBASE ref # 22501
Complete sequence: 1,890,645 bp
GenBank #: LN831035
REBASE acronym: Hin8143
Org_num: 13652
All begin ERS450003_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 866 | inner membrane protein | |||
| 867 | R | HinNTHORFRP (100% identity) | TTTANNNNNNNGTT | Hin8143IP |
| 868 | DNA binding protein | |||
| 869 | anticodon nuclease | |||
| 870 | S | S.HinKR271ORF774P (100% identity) | TTTANNNNNNNGTT | S.Hin8143I |
| 871 | M | M.HinKR271ORF774P (100% identity) | TTTANNNNNNNGTT | M.Hin8143I |
| 872 | oligopeptidase A | |||
| 982 | Signal Recognition Particle (SRP) component with | |||
| 983 | R | HinKR271ORF879P (100% identity) | ATGNNNNNNCCT | Hin8143IIP |
| 984 | S | S.HinP3EMOORF6585P (100% identity) | ATGNNNNNNCCT | S.Hin8143II |
| 985 | transcriptional regulator containing an hth | |||
| 986 | M | M.HinII4ORF8830P (100% identity) | ATGNNNNNNCCT | M.Hin8143II |
| 987 | NIF3-like protein | |||
| 1340 | translation initiation factor IF-2 | |||
| 1341 | R | HinKR271ORF1170P (100% identity) | GGYANNNNNNTGA | Hin8143IIIP |
| 1342 | Uncharacterised protein | |||
| 1343 | S | S.HinKR271ORF1170P (100% identity) | GGYANNNNNNTGA | S.Hin8143III |
| 1344 | M | M.HinKR271ORF1170P (100% identity) | GGYANNNNNNTGA | M.Hin8143III |
| 1345 | 30s ribosome binding factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 632 | Uncharacterised protein | |||
| 633 | M | M.HinY40ORF16420P (100% identity) | M.Hin8143ORF633P | |
| 634 | Uncharacterised protein | |||
| 642 | Uncharacterised protein | |||
| 643 | M | M.HinY40ORF16330P (100% identity) | M.Hin8143ORF643P | |
| 644 | phage antirepressor protein | |||
| 876 | phosphatidylglycerophosphatase B | |||
| 877 | M | M.HinP3EMOORF7155P (100% identity) | GATC | M.Hin8143Dam |
| 878 | 3-dehydroquinate synthase | |||
| 1063 | mu com-like protein | |||
| 1064 | M | M.Hin1560ORF130P (100% identity) | BA | M.Hin8143ORF1064P |
| 1065 | Uncharacterised protein | |||
| 1386 | condesin subunit F | |||
| 1387 | M | M.Hin1560ORF7950P (100% identity) | RGCGCY | M.Hin8143ORF1388P |
| 1388 | R | HinP3EMOORF3885P (100% identity) | RGCGCY | Hin8143ORF1388P |
| 1389 | protein involved in chromosome partitioning | |||
| 1410 | valyl-tRNA synthetase | |||
| 1411 | R | Hin9224ORF6935P (100% identity) | GCGC | Hin8143ORF1413P |
| 1412 | M | M.Hin9224ORF6935P (100% identity) | GCGC | M.Hin8143ORF1413P |
| 1413 | Uncharacterized protein conserved in bacteria | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1825 | ribonuclease HII%2C degrades RNA of DNA-RNA | |||
| ??? | M | M.Hin1560ORF5735P (100% identity) | M.Hin8143ORF1826P | |
| 1829 | R | Hin8143ORF1827P (100% identity) | Hin8143ORF1826P | |
| 1830 | gamma-carboxymuconolactone decarboxylase | |||