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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCTC13348 RM systems
Ref: Informatics,Pathogen. unpublished
REBASE ref # 22501
Sequence length: | GenBank #: | |
chromosome 1: | 3,458,333 bp | LN829401 |
plasmid 2: | 1,105,228 bp | LN829402 |
plasmid 5: | 94,033 bp | LN829405 |
REBASE acronym: Sen13348
Org_num: 15376
All begin ERS450001_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
3017 | restriction endonuclease | |||
3018 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13348IP |
3019 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen13348I |
3020 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13348I |
3022 | membrane protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
109 | phage protein | |||
??? | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen13348ORF110P |
112 | crossover junction endodeoxyribonuclease | |||
776 | phage protein | |||
777 | M | M.StyUK1V (100% identity) | GATC | M.Sen13348ORF777P |
778 | crossover junction endodeoxyribonuclease | |||
823 | metal-dependent phospho hydrolase | |||
824 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen13348DcmP |
825 | V | patch repair protein | V.Sen13348DcmP | |
826 | inner membrane transporter yedA | |||
3052 | DNA repair ATPase | |||
3053 | RM | StyUK1IV (100% identity) | GATCAG | Sen13348III |
3054 | spermidine/putrescine ABC transporter ATPase | |||
plasmid 2 | ||||
3757 | DamX protein | |||
3758 | M | DNA adenine methylase | GATC | M.Sen13348DamP |
3759 | ribulose-phosphate 3-epimerase | |||
3856 | protein yhdU | |||
3857 | M | methyltransferase | ATGCAT | M.Sen13348ORF3857P |
3858 | Fis DNA-binding protein | |||
plasmid 5 | ||||
4931 | cytoplasmic protein | |||
4932 | M | M.StyUK1ORFAP (100% identity) | M.Sen13348ORF4932P | |
4933 | cytoplasmic protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
2514 | cytoplasmic protein | |||
2515 | R | StyUK1IP (99% identity) | CAGAG | Sen13348IIP |
2516 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen13348II |
2517 | metabolite transport protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
3016 | membrane protein | |||
3017 | R | StyUK1MrrP (100% identity) | Sen13348Mrr2P | |
3018 | type I restriction enzyme EcoKI subunit R |