Acidovorax sp. JHL-3 |
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Putative Acidovorax sp. JHL-3 RM systems
Ref: Roden,E. et al. unpublished
REBASE ref # 19247
Contig set: 3,987,984 bp
GenBank #: JAFU00000000 (NZ_JAFU00000000)
REBASE acronym: AspJHL3
Org_num: 10871
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | AspP4ORF19055P (100% identity) | CGCAYNNNNNTCA | AspJHL3VP |
| ??? | S | S.AspP4ORF19055P (100% identity) | CGCAYNNNNNTCA | S.AspJHL3V |
| ??? | M | M.Ade2ANORF778P (98% identity) | CGCAYNNNNNTCA | M.AspJHL3V |
| ??? | M | M.CbaCRORF2703P (91% identity) | CAANNNNNNNRTAC | M.AspJHL3III |
| ??? | S | S.AthLicORFMP (46% identity) | CAANNNNNNNRTAC | S.AspJHL3III |
| ??? | R | AfeSS3ORF832P (88% identity) | CAANNNNNNNRTAC | AspJHL3IIIP |
| ??? | M | M.PspsP16ORF24710P (80% identity) | GGCANNNNNNTGCG | M.AspJHL3IV |
| ??? | S | S.TspPiv1ORF1019P (50% identity) | GGCANNNNNNTGCG | S.AspJHL3IV |
| ??? | R | Rsp29310ORFDP (88% identity) | GGCANNNNNNTGCG | AspJHL3IVP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | AspT1ORFOP (24% identity) | AspJHL3ORFBP | |
| ??? | M | M.Bce439ORFBP (74% identity) | GAGCTC | M.AspJHL3I |
| ??? | R | Sen7349IP (55% identity) | GAGCTC | AspJHL3IP |
| ??? | RM | AspP4ORF10230P (83% identity) | CGCCCAG | AspJHL3II |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.TspSCUT2ORF6410P (57% identity) | M.AspJHL3ORFIP | |
| ??? | R | Ide30977ORF18465P (74% identity) | AspJHL3ORFIP | |
| ??? | M | M.CbaAAWORFBP (74% identity) | M.AspJHL3ORFCP | |
| ??? | R | Psp3121ORFBP (79% identity) | AspJHL3ORFCP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | AspT1ORFPP (97% identity) | AspJHL3ORFJP | |
| ??? | R | AspT1MrrP (80% identity) | AspJHL3Mrr3P | |
| ??? | R | CthS23MrrP (55% identity) | AspJHL3Mrr2P | |
| ??? | R | AspL3GmrSDP (100% identity) | AspJHL3GmrSDP | |