Helicobacter pylori ML1 |
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Putative Helicobacter pylori ML1 RM systems
Ref: Wang,H.-C. et al. unpublished
REBASE ref # 19579
Complete sequence: 1,629,815 bp
GenBank #: AP014710
REBASE acronym: HpyML1
Org_num: 15088
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyP77ORFOP (94% identity) | M.HpyML1ORFXP | |
| ??? | S | S.Hpy199ORFOP (94% identity) | S.HpyML1ORFXP | |
| ??? | R | Hpyfe125ORF4500P (97% identity) | HpyML1ORFXP | |
| ??? | S | S.HpyCR35ORFAP (69% identity) | S.HpyML1ORFVP | |
| ??? | R | HpyT029ORF4580P (95% identity) | HpyML1ORFQP | |
| ??? | M | M.HpyOK317ORFRP (92% identity) | M.HpyML1ORFQP | |
| ??? | S | S.HpyLIM7XI (99% identity) | S.HpyML1ORFQP | |
| ??? | R | HpyTW01XIP (94% identity) | HpyML1ORFFP | |
| ??? | M | M.Hpyfe74ORF7605P (93% identity) | M.HpyML1ORFFP | |
| ??? | S | S.HpyJA101ORF7205P (99% identity) | S.HpyML1ORFFP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpySG38IP (96% identity) | CATG | HpyML1ORFB1P |
| ??? | M | M.Hpyfe97ORF1435P (99% identity) | CATG | M.HpyML1ORFB1P |
| ??? | M | M.HpyML2ORFXP (99% identity) | GCGC | M.HpyML1ORFA1P |
| ??? | R | HpyTW10ORF5245P (94% identity) | TCNNGA | HpyML1ORFZP |
| ??? | M | M.Hpy66VI (100% identity) | TCNNGA | M.HpyML1ORFZP |
| ??? | M | M.HpyOK304ORFXP (93% identity) | GTNNAC | M.HpyML1ORFYP |
| ??? | R | HpyTW05XIP (95% identity) | GTNNAC | HpyML1ORFYP |
| ??? | R | HpyDU7AORFJP (98% identity) | GTAC | HpyML1ORFUP |
| ??? | M | M.Hpy271ORFIP (99% identity) | GTAC | M.HpyML1ORFUP |
| ??? | R | HpyOK34ORFBP (99% identity) | ACNGT | HpyML1ORFSP |
| ??? | M | M.Hpyfe37ORF4750P (82% identity) | ACNGT | M.HpyML1ORFSP |
| ??? | type II adenine specific methyltransferase | |||
| ??? | M | M.HpyT030VII (99% identity) | CTNAG | M.HpyML1ORFPP |
| ??? | R | HpyOK306ORFTP (98% identity) | CTNAG | HpyML1ORFPP |
| ??? | M | M.Hpyfe40ORF5765P (98% identity) | CCGG | M.HpyML1ORFNP |
| ??? | R | HpyBS21ORF6020P (91% identity) | CCGG | HpyML1ORFNP |
| ??? | DNA methyltransferase | |||
| ??? | 217 aa hypothetical protein | |||
| ??? | M | M.HpySG03XIII (100% identity) | TCGA | M.HpyML1ORFOP |
| ??? | M | M.HpyTW04II (95% identity) | GATC | M.HpyML1ORFMP |
| ??? | R | HpyM6CORFHP (94% identity) | GATC | HpyML1ORFMP |
| ??? | M | M2.HpySG17IIIP (70% identity) | CCTC | M2.HpyML1ORFLP |
| ??? | M | M1.HpyOK30ORFNP (98% identity) | CCTC | M1.HpyML1ORFLP |
| ??? | R | HpySG02IXP (76% identity) | GANTC | HpyML1ORFJP |
| ??? | M | M.HpyTW01VIII (99% identity) | GANTC | M.HpyML1ORFJP |
| ??? | N-6 DNA Methylase family protein | |||
| ??? | hypothetical protein | |||
| ??? | RM | HpyTW18ORF280P (82% identity) | HpyML1ORFKP | |
| ??? | R | HpyIS10XIIIP (98% identity) | TGCA | HpyML1ORFGP |
| ??? | M | M.HpyJA109XI (99% identity) | TGCA | M.HpyML1ORFGP |
| ??? | RM | Hpyfe8ORF6945P (91% identity) | HpyML1ORFEP | |
| ??? | RM | Hpyfe52ORF265P (96% identity) | HpyML1ORFCP | |
| ??? | S | S.HpyMA20X (47% identity) | S1.HpyML1ORFCP | |
| ??? | S | S.Hpyfe59ORF275P (48% identity) | S2.HpyML1ORFCP | |
| ??? | R | HpyTW24XIIIP (99% identity) | GAATTC | HpyML1ORFBP |
| ??? | M | M.HpyTW24XIII (99% identity) | GAATTC | M.HpyML1ORFBP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyGU62AORFB1P (93% identity) | HpyML1ORFAP | |
| ??? | M | M.Hpyfe115ORF630P (97% identity) | M.HpyML1ORFAP | |
| ??? | M | M.Hpybs2ORFYP (97% identity) | M.HpyML1ORFIP | |
| ??? | R | Hpyfe120ORF7100P (94% identity) | HpyML1ORFIP | |
| ??? | M | M.Hpy39ORFMP (97% identity) | M.HpyML1ORFDP | |
| ??? | R | HpyTW04ORF7140P (96% identity) | HpyML1ORFDP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpyfe75GmrSD2P (50% identity) | HpyML1GmrSP | |
| ??? | R | HpyOK310GmrSD2P (37% identity) | HpyML1GmrDP | |