Sphingobium species YBL2 |
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Putative Sphingobium species YBL2 RM systems
Ref: Yan,X. unpublished
REBASE ref # 19243
| Sequence length: | GenBank #: | |
| Chromosome: | 4,766,421 bp | CP010954 |
| plasmid YBL2_2: | 227,503 bp | CP010956 |
| plasmid YBL2_6: | 19,339 bp | CP010960 |
REBASE acronym: SspYBL2
Org_num: 15134
All begin TZ53_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3945 | 545 aa hypothetical protein | |||
| 3950 | V | V.Kxy2955ORF16145P (52% identity) | V.SspYBL2ORF3965P | |
| 3955 | R | MstAR4ORFFP (36% identity) | SspYBL2ORF3965P | |
| 3960 | 310 aa hypothetical protein | |||
| 3965 | M | M.Pca992ORF1025P (50% identity) | M.SspYBL2ORF3965P | |
| 3970 | 67 aa hypothetical protein | |||
| 12150 | 73 aa hypothetical protein | |||
| 12155 | RM | M1.Ssp1205ORF1900P (100% identity) | SspYBL2ORF12155AP | |
| 12160 | RM | M2.Ssp1205ORF1900P (100% identity) | SspYBL2ORF12155BP | |
| 12165 | RM | Ssp1205ORF1900P (100% identity) | SspYBL2ORF12155CP | |
| 12170 | 105 aa hypothetical protein | |||
| 13155 | 118 aa hypothetical protein | |||
| 13160 | M | M.NspHII3ORFCP (46% identity) | M.SspYBL2ORF13160P | |
| 13165 | 136 aa hypothetical protein | |||
| 13215 | 81 aa hypothetical protein, partial | |||
| 13220 | M | M.Sya25ORFEP (75% identity) | AAGCTT | M.SspYBL2ORF13220P |
| 13225 | 81 aa hypothetical protein | |||
| 13905 | ArsR family transcriptional regulator | |||
| 13910 | M | M.SspX33ORF515P (100% identity) | GANTC | M.SspYBL2ORF13910P |
| 13915 | dihydropteroate synthase | |||
| plasmid YBL2_2 | ||||
| 22385 | 358 aa hypothetical protein | |||
| 22390 | M | M.SyaF8ORF780P (100% identity) | M.SspYBL2ORF22390P | |
| 22395 | XRE family transcriptional regulator | |||
| plasmid YBL2_6 | ||||
| 25450 | recombinase | |||
| ??? | R | SumRL3ORF190P (100% identity) | CGGCCG | SspYBL2ORF25460P |
| 25460 | M | M.SumRL3ORF190P (100% identity) | CGGCCG | M.SspYBL2ORF25460P |
| 25465 | 96 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3975 | 396 aa hypothetical protein | |||
| 3980 | R | 70 aa hypothetical protein | SspYBL2McrB2P | |
| 3985 | glyoxalase | |||
| 12210 | 151 aa hypothetical protein | |||
| 12215 | R | Ssp1205McrBP (100% identity) | SspYBL2McrBP | |
| 12220 | R | Ssp1205McrCP (96% identity) | SspYBL2McrCP | |