Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1899 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1899 RM systems
Ref: Harhay,D.M. et al. unpublished
REBASE ref # 21435
Complete sequence: 4,856,438 bp
GenBank #: CP007235
REBASE acronym: Sen1899
Org_num: 15103
All begin AX02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | 110 aa hypothetical protein | |||
| 6580 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1899II |
| 6590 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen1899II |
| 6600 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1899IIP |
| 6610 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6210 | 363 aa hypothetical protein | |||
| 6220 | RM | Sen48595ORF20285P (100% identity) | GATCAG | Sen1899ORF6220P |
| 6240 | DNA repair protein | |||
| 27480 | amino acid exporter | |||
| 27490 | V | V.StyUK1DcmP (100% identity) | V.Sen1899DcmP | |
| 27500 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1899DcmP |
| 27510 | phosphohydrolase | |||
| 48685 | 129 aa hypothetical protein | |||
| 27960 | M | M.StyUK1V (100% identity) | GATC | M.Sen1899ORF27960P |
| 48690 | 160 aa hypothetical protein | |||
| 48925 | 129 aa hypothetical protein | |||
| 34540 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen1899ORF34540P |
| 48930 | 160 aa hypothetical protein | |||
| 35530 | endonuclease | |||
| 35540 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen1899ORF35540P |
| 35550 | 75 aa hypothetical protein | |||
| 42450 | Fis family transcriptional regulator | |||
| 42460 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1899III |
| 42470 | DUF2556 domain-containing protein | |||
| 43420 | ribulose-phosphate 3-epimerase | |||
| 43430 | M | DNA adenine methylase | GATC | M.Sen1899DamP |
| 43440 | SPOR domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11050 | MFS transporter | |||
| 11060 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1899I |
| 11070 | R | StyUK1IP (99% identity) | CAGAG | Sen1899IP |
| 11090 | cytochrome ubiquinol oxidase subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6600 | type I restriction-modification system | |||
| 6610 | R | StyUK1MrrP (100% identity) | Sen1899MrrP | |
| 6620 | 95 aa hypothetical protein | |||