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Putative Yersinia ruckeri SC09 RM systems
Ref: Wang,K.Y. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19131
Sequence length: | GenBank #: | |
Chromosome: | 3,913,794 bp | JRWX00000000 (NZ_JRWX00000000) |
Chromosome: | 3,799,871 bp | CP025800 |
plasmid pWKY: | 73,051 bp | CP025801 |
REBASE acronym: YruSC09
Org_num: 15043
All begin NJ56_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
??? | M | M.YruSC09ORF11985P (69% identity) | GATC | M.YruSC09ORFAP |
17550 | crossover junction endodeoxyribonuclease | |||
17570 | 272 aa hypothetical protein | |||
17575 | M | M.YruCreekORF9835P (100% identity) | M.YruSC09ORF17575P | |
17580 | alpha/beta hydrolase | |||
17220 | 221 aa hypothetical protein | |||
17225 | M | M.Yru4840ORF17120P (99% identity) | CCNGG | M.YruSC09ORF17225P |
17230 | 225 aa hypothetical protein | |||
2480 | 696 aa hypothetical protein | |||
2485 | R | YruCreekORF1510P (100% identity) | CCWGG | YruSC09ORF2490P |
2490 | M | M.YruCreekORF1510P (100% identity) | CCWGG | M.YruSC09ORF2490P |
2495 | V | V.Yru163ORF15120P (100% identity) | V.YruSC09ORF2490P | |
2500 | type II restriction endonuclease | |||
2495 | DNA mismatch repair protein Vsr | |||
2500 | R | CspHMR1ORF19248P (49% identity) | CCWGG | YruSC09ORF2500P |
2505 | 325 aa hypothetical protein | |||
12990 | ribulose-phosphate 3-epimerase | |||
12995 | M | M.YruCreekDamP (100% identity) | GATC | M.YruSC09DamP |
13000 | 326 aa hypothetical protein | |||
10005 | transcriptional regulator | |||
10010 | M | M.Yru161ORF6780P (99% identity) | GATC | M.YruSC09ORF10010P |
10015 | pseudogene | |||
Chromosome | ||||
3545 | type II restriction endonuclease | |||
3550 | V | V.Yru163ORF15120P (100% identity) | V.YruSC09ORF2490P | |
3555 | M | M.YruCreekORF1510P (100% identity) | CCWGG | M.YruSC09ORF2490P |
3560 | R | YruCreekORF1510P (100% identity) | CCWGG | YruSC09ORF2490P |
3565 | RNA helicase | |||
7110 | SPOR domain-containing protein | |||
7115 | M | M.YruCreekDamP (100% identity) | GATC | M.YruSC09DamP |
7120 | ribulose-phosphate 3-epimerase | |||
11980 | helix-turn-helix domain-containing protein | |||
11985 | M | M.Yru9681ORF11040P (99% identity) | M.YruSC09ORF11985P | |
11990 | RusA family crossover junction | |||
12010 | antitermination protein | |||
12015 | M | M.YruCreekORF9835P (100% identity) | M.YruSC09ORF17575P | |
12020 | alpha/beta hydrolase | |||
13480 | replication endonuclease | |||
13485 | M | M.Yru161ORF6780P (99% identity) | GATC | M.YruSC09ORF10010P |
13490 | DUF2732 domain-containing protein | |||
plasmid pWKY | ||||
17860 | 221 aa hypothetical protein | |||
17865 | M | M.Yru4840ORF17120P (99% identity) | CCNGG | M.YruSC09ORF17225P |
17870 | 225 aa hypothetical protein |