Aphanizomenon flos-aquae 2012/KM/D3 |
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Putative Aphanizomenon flos-aquae 2012/KM/D3 RM systems
Ref: Sulcius,S. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19108
Contig set: 5,741,771 bp
GenBank #: JSDP00000000 (NZ_JSDP00000000)
REBASE acronym: Afl2012
Org_num: 14917
All begin OA07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24505 | 72 aa hypothetical protein | |||
| ??? | M | M.Dsp315AORF435P (71% identity) | M.Afl2012ORF24510P | |
| 24520 | 87 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4060 | 81 aa hypothetical protein | |||
| ??? | M | M.Dco806ORF45620P (81% identity) | M.Afl2012ORF4065P | |
| 4075 | 200 aa hypothetical protein | |||
| 5140 | M | Asp90ORF12010P (24% identity) | M.Afl2012ORF5140P | |
| 5145 | pseudogene | |||
| 7240 | RM | Dco806ORF20870P (48% identity) | CTGGAG | Afl2012ORF7240P |
| 7245 | lipid-A-disaccharide synthase | |||
| 7415 | M | M.Dco806ORF45130P (87% identity) | CYCGRG | M.Afl2012ORF7415P |
| 7420 | R | Dco806ORF45130P (94% identity) | CYCGRG | Afl2012ORF7415P |
| 7425 | pterin-4-alpha-carbinolamine dehydratase | |||
| 7935 | endonuclease DDE | |||
| 7940 | M | M.Dhe447ORF18500P (99% identity) | TGCGCA | M.Afl2012ORF7940P |
| 7945 | R | Afl81ORFQP (100% identity) | TGCGCA | Afl2012ORF7940P |
| 7950 | XRE family transcriptional regulator | |||
| 8405 | 80 aa hypothetical protein | |||
| 8410 | M | M.AflORFVP (99% identity) | GGWCC | M.Afl2012ORF8410P |
| 8415 | R | Asp7108ORFUP (92% identity) | Afl2012ORF8410P | |
| 8420 | 64 aa hypothetical protein | |||
| 12380 | 258 aa hypothetical protein | |||
| 12385 | RM | AflORF3850P (40% identity) | Afl2012ORF12385P | |
| 15230 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| ??? | C | C.Dco806ORF8600P (100% identity) | C.Afl2012ORF15245P | |
| 15240 | R | Dco806ORF8600P (69% identity) | AGTACT | Afl2012ORF15245P |
| 15245 | M | M.Dco806ORF8600P (99% identity) | AGTACT | M.Afl2012ORF15245P |
| 15250 | 3,4-dihydroxy-2-butanone 4-phosphate synthase | |||
| 8200 | 191 aa hypothetical protein | |||
| 8205 | M | M.Dhe447ORF10540P (99% identity) | GGWCC | M.Afl2012ORF8205P |
| 8210 | R | AspWA102ORF25305P (98% identity) | GGWCC | Afl2012ORF8205P |
| 8215 | pilus assembly protein | |||
| 8845 | 118 aa hypothetical protein | |||
| ??? | M | M.AflORF11990P (84% identity) | GGWCC | M.Afl2012ORFBP |
| 8855 | prevent-host-death protein | |||
| 12485 | 101 aa hypothetical protein | |||
| 12490 | R | Afl2012ORF7600P (100% identity) | Afl2012ORF12495P | |
| ??? | M | M.AspWA102ORF18270P (97% identity) | M.Afl2012ORF12495P | |
| 12510 | iron transporter FeoA | |||
| 24930 | 160 aa hypothetical protein | |||
| 24935 | M | M.NspNUC1ORF5138P (86% identity) | TCCGGA | M.Afl2012ORF18775P |
| 24940 | R | NspN6ORF4457P (85% identity) | TCCGGA | Afl2012ORF18775P |
| 24945 | 113 aa hypothetical protein | |||
| 16130 | 73 aa hypothetical protein | |||
| 16135 | M | M.Nsp53789ORF29775P (75% identity) | GCGCGC | M.Afl2012ORF16135P |
| 16140 | R | Ski73ORF33040P (83% identity) | GCGCGC | Afl2012ORF16135P |
| 16145 | fatty-acid oxidation protein subunit alpha | |||
| 11620 | ATP synthase F0F1 subunit epsilon | |||
| 11625 | RM | Dco806ORF2840P (92% identity) | Afl2012ORF11625P | |
| 11630 | 105 aa hypothetical protein | |||
| 20220 | 153 aa hypothetical protein | |||
| 20225 | M | M.AspWA102ORF2825P (72% identity) | M.Afl2012ORF20225P | |
| 3695 | 62 aa hypothetical protein | |||
| 3700 | M | M.Lro951ORF29835P (51% identity) | CCRYGG | M.Afl2012ORF3700P |
| 3705 | R | Dsa8305ORF1067P (65% identity) | CCRYGG | Afl2012ORF3700P |
| 3710 | RNA helicase | |||
| 345 | beta-lactamase superfamily protein | |||
| 350 | M | M.Afl81ORFJ1P (98% identity) | CGATCG | M.Afl2012ORF350P |
| 355 | pseudogene | |||
| 18445 | histidinol-phosphate aminotransferase | |||
| 18450 | M | M.Afl2012ORF14915P (96% identity) | RGCGCY | M.Afl2012ORF18450P |
| 18455 | 70 aa hypothetical protein | |||
| 3775 | membrane protein | |||
| ??? | RM | Dsp315AORF2969P (64% identity) | Afl2012ORFAP | |
| 3785 | 241 aa hypothetical protein | |||
| 3710 | RNA helicase | |||
| ??? | M | M.Dhe447ORF23160P (85% identity) | M.Afl2012ORF3715P | |
| 3720 | deoxyribose-phosphate aldolase | |||
| 6835 | 105 aa hypothetical protein | |||
| 6840 | RM | Afl2012ORF24575P (99% identity) | Afl2012ORF6840P | |
| 6845 | pyridine nucleotide-disulfide oxidoreductase | |||
| 24570 | 105 aa hypothetical protein | |||
| 24575 | RM | Afl2012ORF6840P (99% identity) | Afl2012ORF24575P | |
| 24580 | signal recognition particle | |||
| 6745 | 75 aa hypothetical protein | |||
| 6750 | R | Asp90ORF10676P (72% identity) | CAGNNNCTG | Afl2012ORF6755P |
| 6755 | M | M.Asp90ORF10676P (16% identity) | CAGNNNCTG | M.Afl2012ORF6755P |
| 20635 | cytochrome b(N-terminal)/b6/petB | |||
| ??? | M | M.AspWA102I (90% identity) | GGCC | M.Afl2012ORF20640P |
| 20645 | anthranilate phosphoribosyltransferase | |||
| 14910 | histidinol-phosphate aminotransferase | |||
| 14915 | M | M.Afl2012ORF18450P (96% identity) | RGCGCY | M.Afl2012ORF14915P |
| 14920 | 70 aa hypothetical protein | |||
| 10605 | 424 aa hypothetical protein | |||
| 10610 | C | C.Dco806ORF38310P (100% identity) | C.Afl2012ORF10620P | |
| 10615 | R | Dco806ORF38310P (99% identity) | ACRYGT | Afl2012ORF10620P |
| ??? | M | M.Dco806ORF38310P (97% identity) | ACRYGT | M.Afl2012ORF10620P |
| 10625 | glucose-1-phosphate adenylyltransferase | |||
| 13365 | 359 aa hypothetical protein | |||
| 13370 | R | AspWA102ORF10505P (73% identity) | GTCGAC | Afl2012ORF13375P |
| 13375 | M | M.AspWA102ORF10505P (95% identity) | GTCGAC | M.Afl2012ORF13375P |
| 13380 | 71 aa hypothetical protein | |||
| 17465 | 196 aa hypothetical protein | |||
| ??? | R | Asp90ORF11774P (90% identity) | GTMKAC | Afl2012ORF17475P |
| 17475 | M | M.Asp90ORF11774P (95% identity) | M.Afl2012ORF17475P | |
| 17480 | geranylgeranyl diphosphate reductase | |||
| 7590 | 101 aa hypothetical protein | |||
| 7595 | R | Afl2012ORF12495P (100% identity) | Afl2012ORF7600P | |
| 7600 | M | M.AspWA102ORF18270P (100% identity) | M.Afl2012ORF7600P | |
| 7605 | iron transporter FeoA | |||
| 10880 | 82 aa hypothetical protein, partial | |||
| 10885 | R | PamM71ORF4865P (17% identity) | TCGCGA | Afl2012ORF10890P |
| 10890 | M | M.PamM71ORF4865P (73% identity) | TCGCGA | M.Afl2012ORF10890P |
| 10895 | 94 aa hypothetical protein | |||
| 2150 | helicase-related protein | |||
| 2155 | RM | Dhe447ORF8955P (93% identity) | Afl2012ORF2155P | |
| 185 | 119 aa hypothetical protein | |||
| 190 | M | M.Afl14aORF1820P (95% identity) | GATC | M.Afl2012ORF190P |
| 195 | 120 aa hypothetical protein | |||
| 4890 | 82 aa hypothetical protein | |||
| 4895 | R | PyaNHR1ORF7075P (52% identity) | GGYRCC | Afl2012ORF4900P |
| 4900 | M | M.CcuG1ORF6960P (83% identity) | GGYRCC | M.Afl2012ORF4900P |
| 4905 | 71 aa hypothetical protein | |||
| 9955 | ribosome-binding factor A | |||
| ??? | M | M.AspWA102ORF7170P (87% identity) | GATC | M.Afl2012ORF9960P |
| 9970 | 406 aa hypothetical protein | |||
| 18765 | 113 aa hypothetical protein | |||
| 18770 | R | NspN6ORF4457P (85% identity) | TCCGGA | Afl2012ORF18775P |
| 18775 | M | M.NspNUC1ORF5138P (86% identity) | TCCGGA | M.Afl2012ORF18775P |
| 18780 | 160 aa hypothetical protein | |||
| 21540 | membrane protein | |||
| 21545 | R | Dsp315AORF2351P (95% identity) | CAGCTG | Afl2012ORF21550P |
| 21550 | M | M.Asp90ORF11009P (93% identity) | CAGCTG | M.Afl2012ORF21550P |
| 21555 | transcriptional regulator | |||
| 13950 | lipid-A-disaccharide synthase | |||
| 13955 | RM | Dco806ORF20870P (48% identity) | CTGGAG | Afl2012ORF7240P |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12175 | R | AspWA102ORF1955P (51% identity) | Afl2012ORF12180P | |
| 12180 | M | M.Bbr675ORF624P (60% identity) | M.Afl2012ORF12180P | |
| 12185 | 103 aa hypothetical protein | |||