Vibrio cholerae CP1035(8) |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae CP1035(8) RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15482
Contig set: 3,934,037 bp
GenBank #: AJRM00000000 (NZ_AJRM00000000)
REBASE acronym: Vch1035
Org_num: 14859
All begin VCCP1035_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3669 | S | type I restriction modification DNA specificity | S.Vch1035ORF3669P | |
| 3724 | 69 aa hypothetical protein | |||
| 3725 | M | M2.VchHC1A2ORF14P (97% identity) | M.Vch1035ORF3725P | |
| 3726 | S | S.Pte16098ORF8765P (73% identity) | S.Vch1035ORF3725P | |
| 1 | R | Psp43101ORF2880P (97% identity) | Vch1035ORF1P | |
| 2 | 802 aa hypothetical protein | |||
| 3666 | phage integrase family protein | |||
| 3667 | M | M.SspANAORF4240P (94% identity) | M.Vch1035ORF3667P | |
| 3668 | S | S.Vpa114ORF13540P (50% identity) | S.Vch1035ORF3667P | |
| 999 | 331 aa hypothetical protein | |||
| 1000 | S | S.Vfl0008ORFAP (70% identity) | S.Vch1035ORF1001P | |
| 1001 | M | M.Vfl560ORFAP (99% identity) | M.Vch1035ORF1001P | |
| 1002 | seed maturation family protein | |||
| 1003 | 110 aa hypothetical protein | |||
| 1004 | 39 aa hypothetical protein | |||
| 1005 | R | VaeU29ORF17790P (97% identity) | Vch1035ORF1001P | |
| 1006 | 806 aa hypothetical protein | |||
| 3278 | 62 aa hypothetical protein | |||
| 3279 | M | M1.Vsp811ORF18745P (99% identity) | M.Vch1035ORF3279P | |
| 3280 | 209 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3117 | ribulose-phosphate 3-epimerase | |||
| 3118 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch1035DamP |
| 3119 | sporulation related domain protein | |||
| 706 | 587 aa hypothetical protein | |||
| 707 | RM | Van11008ORF50P (97% identity) | Vch1035ORF707P | |
| 708 | pglZ domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 915 | intracellular septation A family protein | |||
| 916 | R | VchN1ORF13700P (100% identity) | Vch1035ORF916P | |
| 917 | 75 aa hypothetical protein | |||