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Putative Vibrio cholerae HC-78A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,935,907 bp
GenBank #: AGUZ00000000 (NZ_AGUZ00000000)
REBASE acronym: Vch78A1
Org_num: 14858
All begin VCHC78A1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
17 | transcriptional regulator | |||
18 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch78A1ORF18P | |
19 | 209 aa hypothetical protein | |||
20 | divergent AAA domain protein | |||
21 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch78A1ORF18P | |
22 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch78A1ORF18P | |
23 | R | VchHC1A2ORF14P (100% identity) | Vch78A1ORF18P | |
24 | DNA-binding protein | |||
10 | prophage DNA-binding domain protein | |||
11 | S | S.Vch61A2ORF3583P (90% identity) | S.Vch78A1ORF12P | |
12 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch78A1ORF12P | |
13 | R | Vch57A1ORF2884P (100% identity) | Vch78A1ORF12P | |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2875 | ribulose-phosphate 3-epimerase | |||
2876 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch78A1DamP |
2877 | sporulation related domain protein | |||
3626 | integrase | |||
3627 | M | M.VchHC1A2ORF827P (100% identity) | M.Vch78A1ORF3627P | |
3628 | R | VchHC1A2ORF827P (100% identity) | Vch78A1ORF3627P | |
3629 | transposase | |||
2638 | 1229 aa hypothetical protein | |||
2639 | RM | VchHC1A2ORF1592P (100% identity) | Vch78A1ORF2639P | |
2640 | pglZ domain protein |