Vibrio cholerae HC-55A1 |
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Putative Vibrio cholerae HC-55A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15482
Contig set: 3,925,908 bp
GenBank #: ALDV00000000 (NZ_ALDV00000000)
REBASE acronym: Vch55A1
Org_num: 14868
All begin VCHC55A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | transcriptional regulator | |||
| 3 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch55A1ORF3P | |
| 4 | 209 aa hypothetical protein | |||
| 5 | divergent AAA domain protein | |||
| 6 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch55A1ORF3P | |
| 7 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch55A1ORF3P | |
| 8 | R | VchHC1A2ORF14P (100% identity) | Vch55A1ORF3P | |
| 9 | DNA-binding protein | |||
| 2969 | prophage DNA-binding domain protein | |||
| 2970 | S | S.Vch61A2ORF3583P (100% identity) | S.Vch55A1ORF2971P | |
| 2971 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch55A1ORF2971P | |
| 2972 | R | R1.VchHC1A2ORF3625P (100% identity) | Vch55A1ORF2971P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2798 | ribulose-phosphate 3-epimerase | |||
| 2799 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch55A1DamP |
| 2800 | sporulation related domain protein | |||
| 3671 | integrase | |||
| 3672 | M | M.VchHC1A2ORF827P (93% identity) | M.Vch55A1ORF3672P | |
| 3673 | R | VchHC1A2ORF827P (100% identity) | Vch55A1ORF3672P | |
| 710 | 1229 aa hypothetical protein | |||
| 711 | RM | VchHC1A2ORF1592P (100% identity) | Vch55A1ORF711P | |
| 712 | pglZ domain protein | |||