Vibrio cholerae HC-52A1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae HC-52A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,927,548 bp
GenBank #: ALDU00000000 (NZ_ALDU00000000)
REBASE acronym: Vch52A1
Org_num: 14879
All begin VCHC52A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | transcriptional regulator | |||
| 3 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch52A1ORF3P | |
| 4 | 209 aa hypothetical protein | |||
| 5 | divergent AAA domain protein | |||
| 6 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch52A1ORF3P | |
| 7 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch52A1ORF3P | |
| 8 | R | VchHC1A2ORF14P (100% identity) | Vch52A1ORF3P | |
| 9 | DNA-binding protein | |||
| 2973 | prophage DNA-binding domain protein | |||
| 2974 | S | S.Vch78A1ORF12P (100% identity) | S.Vch52A1ORF2975P | |
| 2975 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch52A1ORF2975P | |
| 2976 | R | Vch78A1ORF12P (100% identity) | Vch52A1ORF2975P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2800 | ribulose-phosphate 3-epimerase | |||
| 2801 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch52A1DamP |
| 2802 | sporulation related domain protein | |||
| 3676 | integrase | |||
| 3677 | M | M.VchHC1A2ORF827P (95% identity) | M.Vch52A1ORF3677P | |
| 3678 | R | VchHC1A2ORF827P (100% identity) | Vch52A1ORF3677P | |
| 709 | 1229 aa hypothetical protein | |||
| 710 | RM | VchHC1A2ORF1592P (100% identity) | Vch52A1ORF710P | |
| 711 | pglZ domain protein | |||