Vibrio cholerae HC-02C1 |
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Putative Vibrio cholerae HC-02C1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,939,397 bp
GenBank #: AJSH00000000 (NZ_AJSH00000000)
REBASE acronym: Vch02C1
Org_num: 14863
All begin VCHC02C1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5 | transcriptional regulator | |||
| 6 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch02C1ORF6P | |
| 7 | 209 aa hypothetical protein | |||
| 8 | divergent AAA domain protein | |||
| 9 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch02C1ORF6P | |
| 10 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch02C1ORF6P | |
| 11 | R | VchHC1A2ORF14P (100% identity) | Vch02C1ORF6P | |
| 12 | DNA-binding protein | |||
| 2952 | prophage DNA-binding domain protein | |||
| 2953 | S | S.Vch78A1ORF12P (100% identity) | S.Vch02C1ORF2954P | |
| 2954 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch02C1ORF2954P | |
| 2955 | R | Vch78A1ORF12P (100% identity) | Vch02C1ORF2954P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2783 | ribulose-phosphate 3-epimerase | |||
| 2784 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch02C1DamP |
| 2785 | sporulation related domain protein | |||
| 3626 | phage integrase | |||
| 3627 | M | M.VchHC1A2ORF827P (95% identity) | M.Vch02C1ORF3627P | |
| 3628 | R | VchHC1A2ORF827P (100% identity) | Vch02C1ORF3627P | |
| 3629 | transposase | |||
| 711 | 1229 aa hypothetical protein | |||
| 712 | RM | VchHC1A2ORF1592P (100% identity) | Vch02C1ORF712P | |
| 713 | pglZ domain protein | |||