Scalindua brodae |
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Putative Scalindua brodae RM systems
Ref: Speth,D.R. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19116
Contig set: 4,084,168 bp
GenBank #: JRYO00000000 (NZ_JRYO00000000)
REBASE acronym: SbrRU1
Org_num: 14854
All begin SCABRO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2501 | R | DbaSRB1ORF1440P (55% identity) | SbrRU1ORF2501P | |
| 2502 | 116 aa hypothetical protein | |||
| 2119 | R | PspSCADCORF205255P (23% identity) | SbrRU1ORF2129P | |
| 2120 | 339 aa hypothetical protein | |||
| 2121 | ATP-dependent DNA helicase RecG | |||
| 2122 | 116 aa hypothetical protein | |||
| 2123 | 597 aa hypothetical protein | |||
| 2124 | 158 aa hypothetical protein | |||
| 2125 | S | S.MmaTMAORF21640P (37% identity) | S.SbrRU1ORF2129P | |
| 2126 | Nucleotidyltransferase substrate binding protein | |||
| 2127 | methyltransferase | |||
| 2128 | 39 aa hypothetical protein | |||
| 2129 | M | M.DspBuS5ORF585P (75% identity) | M.SbrRU1ORF2129P | |
| 2131 | 67 aa hypothetical protein | |||
| 2359 | pseudouridine synthase | |||
| 2360 | R | Pfe45IP (56% identity) | SbrRU1ORF2364P | |
| 2361 | 268 aa hypothetical protein | |||
| 2362 | 93 aa hypothetical protein | |||
| 2363 | endonuclease | |||
| 2364 | M | M.McuBSORF739P (50% identity) | M.SbrRU1ORF2364P | |
| 2365 | S | S.Psp119ORFCP (15% identity) | S.SbrRU1ORF2364P | |
| 458 | 239 aa hypothetical protein | |||
| 459 | R | Fsp83ORFFP (74% identity) | SbrRU1ORF462P | |
| 460 | 279 aa hypothetical protein | |||
| 461 | S | S.Fsp34673ORFIP (36% identity) | S.SbrRU1ORF462P | |
| 462 | M | M.SspKL21ORFBP (67% identity) | M.SbrRU1ORF462P | |
| 3580 | 72 aa hypothetical protein | |||
| 3581 | S | S.Psp1288ORF20650P (56% identity) | S.SbrRU1ORF3582P | |
| 3582 | DNA-methyltransferase | |||
| 2208 | 227 aa hypothetical protein | |||
| 2209 | R | FspSB02ORF12040P (78% identity) | SbrRU1ORF2213P | |
| 2210 | 357 aa hypothetical protein | |||
| 2211 | 161 aa hypothetical protein | |||
| 2212 | S | S.SspADCORF17930P (33% identity) | S.SbrRU1ORF2213P | |
| 2213 | M | M.PbaG22ORF430P (49% identity) | M.SbrRU1ORF2213P | |
| 2214 | amidohydrolase | |||
| 2321 | flavonol sulfotransferase | |||
| 2322 | R | Dsp32ORF3468P (70% identity) | SbrRU1ORF2326P | |
| 2323 | S | S.FspJ281ORFEP (55% identity) | S.SbrRU1ORF2326P | |
| 2324 | Divergent AAA domain protein | |||
| 2325 | 342 aa hypothetical protein | |||
| 2326 | M | M.PprWB4ORF2959P (87% identity) | M.SbrRU1ORF2326P | |
| 2327 | 33 aa hypothetical protein | |||
| 2494 | 283 aa hypothetical protein | |||
| 2495 | M | M.MthIOM01ORF14205P (70% identity) | M.SbrRU1ORF2495P | |
| 2496 | S | S.CraN8ORFBP (35% identity) | S.SbrRU1ORF2495P | |
| 2497 | 78 aa hypothetical protein | |||
| 2498 | R | Vap1004ORFBP (49% identity) | SbrRU1ORF2495P | |
| 662 | 243 aa hypothetical protein | |||
| 663 | R | XnePORF3931P (68% identity) | SbrRU1ORF665P | |
| 664 | S | S.MfeJV1ORF12480P (55% identity) | S.SbrRU1ORF665P | |
| 665 | M | M.Mlu98ORFEP (80% identity) | M.SbrRU1ORF665P | |
| 666 | 70 aa hypothetical protein | |||
| 867 | 248 aa hypothetical protein | |||
| 868 | S | S.TpaARh1ORF11065P (34% identity) | S.SbrRU1ORF868P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1679 | 196 aa hypothetical protein | |||
| ??? | M | M.SbrRU1ORF3423P (74% identity) | M.SbrRU1ORF1680P | |
| 3422 | 51 aa hypothetical protein | |||
| 3423 | M | M.SbrRU1ORF1680P (74% identity) | M.SbrRU1ORF3423P | |
| 3424 | glycosyltransferase | |||
| 2411 | heat shock protein DnaJ | |||
| 2412 | M | M.SbrRU1ORF3423P (60% identity) | M.SbrRU1ORF2412P | |
| 2413 | 360 aa hypothetical protein | |||
| 3726 | orf | |||
| 3727 | R | SbrRU1ORF784P (45% identity) | CTCGAG | SbrRU1ORF3728P |
| 3728 | M | M.SbrRU1ORF784P (69% identity) | CTCGAG | M.SbrRU1ORF3728P |
| 3729 | 73 aa hypothetical protein | |||
| 782 | 287 aa hypothetical protein | |||
| 783 | R | DbaSRB2ORF839P (71% identity) | CTCGAG | SbrRU1ORF784P |
| 784 | M | M.DbaSRB2ORF839P (73% identity) | CTCGAG | M.SbrRU1ORF784P |
| 785 | 31 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3775 | cobalamin 5-phosphate synthase | |||
| 3776 | R | DbaSRB2ORF3107P (13% identity) | SbrRU1ORF3778P | |
| 3777 | 166 aa hypothetical protein | |||
| 3778 | M | M.Fpa1ORF16070P (66% identity) | M.SbrRU1ORF3778P | |
| 3779 | 50 aa hypothetical protein | |||
| 483 | excinuclease ABC subunit B | |||
| 484 | M | M.PbaD1ORF2220P (64% identity) | M.SbrRU1ORF484P | |
| 485 | 113 aa hypothetical protein | |||
| 486 | 103 aa hypothetical protein | |||
| 487 | 132 aa hypothetical protein | |||
| 488 | R | DspN47ORF130P (61% identity) | SbrRU1ORF484P | |
| 489 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2695 | 245 aa hypothetical protein | |||
| ??? | R | ZspM22ORF16615P (71% identity) | SbrRU1ORF2696P | |
| 2698 | plasmid maintenance protein HigB | |||