Bifidobacterium kashiwanohense JCM 15439 |
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Putative Bifidobacterium kashiwanohense JCM 15439 RM systems
Ref: Toh,H. et al. unpublished
REBASE ref # 19013
Complete sequence: 2,337,234 bp
GenBank #: AP012327
REBASE acronym: Bka15439
Org_num: 14832
All begin BBKW_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 780 | amino acid ABC transporter permease | |||
| 781 | R | BkaJ1ORF886P (100% identity) | Bka15439ORF782P | |
| 782 | M | M.BkaJ1ORF886P (100% identity) | M.Bka15439ORF782P | |
| ??? | S | S1.BloBPORF2330P (100% identity) | S1.Bka15439ORF782P | |
| 783 | S | S2.Bbi4319ORF1329P (99% identity) | S2.Bka15439ORF782P | |
| 784 | integrase | |||
| ??? | S | S2.Bps1ORF3835P (52% identity) | S3.Bka15439ORF782P | |
| 785 | 288 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 797 | 399 aa hypothetical protein | |||
| 798 | M | M.BkaJ1I (100% identity) | CCWGG | M.Bka15439ORF798P |
| 799 | R | BkaJ1IP (100% identity) | CCWGG | Bka15439ORF798P |
| 800 | 352 aa conserved hypothetical protein | |||
| 967 | 260 aa conserved hypothetical protein | |||
| 968 | M | M.Bps11027ORF8990P (100% identity) | CCWGG | M.Bka15439ORF968P |
| 969 | R | BloW11ORF1248P (100% identity) | CCWGG | Bka15439ORF968P |
| 970 | 147 aa conserved hypothetical protein | |||
| 1061 | 68 aa hypothetical protein | |||
| 1062 | M | M.BkaJ1ORF1104P (75% identity) | AAGCTT | M.Bka15439ORF1062P |
| 1063 | 249 aa conserved hypothetical protein | |||
| 1284 | 610 aa conserved hypothetical protein | |||
| 1285 | M | M.BloZJ1ORFBP (99% identity) | M.Bka15439ORF1285P | |
| 1286 | 418 aa hypothetical protein | |||
| 1758 | 120 aa hypothetical protein | |||
| 1759 | R | R1.BpsS12ORF8220P (98% identity) | GGCGCC | R1.Bka15439ORF1761P |
| 1760 | R | BloB5ORF10755P (98% identity) | GGCGCC | R2.Bka15439ORF1761P |
| 1761 | M | M.BpsS12ORF8220P (99% identity) | GGCGCC | M.Bka15439ORF1761P |
| 1762 | 192 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1212 | 238 aa conserved hypothetical protein | |||
| 1213 | M | M.BspN4G05ORF3345P (22% identity) | M.Bka15439ORF1213AP | |
| 1215 | 141 aa hypothetical protein | |||
| 1214 | M | M.BspN4G05ORF3345P (33% identity) | M.Bka15439ORF1213BP | |
| 1216 | R | BspN4G05ORF3345P (100% identity) | Bka15439ORF1213P | |
| 1217 | 287 aa conserved hypothetical protein | |||
| 1251 | 134 aa hypothetical protein | |||
| 1252 | R | Blo10035ORF1081P (99% identity) | Bka15439ORF1253P | |
| ??? | M | M.Blo10035ORF1081P (100% identity) | M.Bka15439ORF1253P | |
| 1255 | 390 aa hypothetical protein | |||