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Putative Leptolyngbya boryana dg5 RM systems
Ref: Hiraide,Y. et al. Plant Cell Physiol. 56 (2), 334-345 (2015)
REBASE ref # 18982
Sequence length: | GenBank #: | |
Chromosome: | 6,176,365 bp | AP014642 |
plasmid pLBA: | 77,793 bp | AP014643 |
plasmid pLBX: | 504,942 bp | AP014644 |
REBASE acronym: LboDg5
Org_num: 14781
All begin LBDG_, LBDG_A, LBDG_X
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
16750 | SODM2 Superoxide dismutase | |||
16760 | S | S.Lbo2135ORF49350P (100% identity) | S.LboDg5ORFJP | |
16770 | 141 aa hypothetical protein | |||
16780 | 72 aa conserved hypothetical protein | |||
16790 | M | M.Lbo594ORF24560P (100% identity) | M.LboDg5ORFJP | |
16800 | R | Lbo594ORF24560P (100% identity) | LboDg5ORFJP | |
16810 | 141 aa hypothetical protein | |||
39540 | 88 aa hypothetical protein | |||
39550 | S | S.Lbo594ORF13085P (100% identity) | S.LboDg5ORFEP | |
39560 | 114 aa hypothetical protein | |||
39570 | DNA polymerase beta domain-containing protein | |||
39580 | 116 aa hypothetical protein | |||
39590 | DNA polymerase beta domain protein region | |||
39600 | M | M.Lbo594ORF13085P (100% identity) | M.LboDg5ORFEP | |
39610 | 378 aa conserved hypothetical protein | |||
39620 | R | Lbo594ORF13085P (100% identity) | LboDg5ORFEP | |
39630 | 352 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18080 | 172 aa hypothetical protein | |||
??? | M | M.Lbo594ORF23910P (100% identity) | AGCT | M.LboDg5ORFIP |
18100 | 1406 aa hypothetical protein | |||
19790 | 101 aa hypothetical protein | |||
19800 | M | M.LboCZ1ORF5170P (100% identity) | GATC | M.LboDg5ORFHP |
19810 | ABC-type multidrug transport system, permease | |||
24560 | deoxyribose-phosphate aldolase | |||
24570 | M | M.Lbo594ORF20665P (100% identity) | M.LboDg5ORFGP | |
24580 | geranylgeranyl reductase | |||
31590 | 97 aa hypothetical protein | |||
31600 | M | M.Lbo594ORF17135P (100% identity) | TCTAGA | M.LboDg5ORFFP |
31610 | 160 aa hypothetical protein | |||
47120 | 159 aa hypothetical protein | |||
47130 | M | M.Lbo594ORF8735P (100% identity) | TCCGGA | M.LboDg5ORF47130P |
47140 | 402 aa hypothetical protein | |||
50260 | 66 aa hypothetical protein | |||
??? | M | M.Lbo2135ORF14200P (100% identity) | CGATCG | M.LboDg5ORFDP |
50280 | SufE protein probably involved in Fe-S center | |||
plasmid pLBA | ||||
270 | 254 aa hypothetical protein | |||
??? | M | M.Lbo594ORF10595P (100% identity) | CCCGGG | M.LboDg5ORFAP |
280 | integrase-recombinase protein | |||
630 | 129 aa hypothetical protein | |||
640 | M | M.Lbo594ORF10280P (100% identity) | M.LboDg5ORFBP | |
650 | 268 aa hypothetical protein | |||
plasmid pLBX | ||||
950 | 90 aa hypothetical protein | |||
960 | M | M.Lbo594ORF33125P (100% identity) | M.LboDg5ORFCP | |
970 | Cell division protein FtsH | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
33070 | 82 aa hypothetical protein | |||
??? | R | Lbo594MrrP (100% identity) | LboDg5MrrP | |
33100 | RNA-metabolising metallo-beta-lactamase | |||
plasmid pLBX | ||||
280 | restriction enzyme | |||
290 | R | Lbo2135McrCP (100% identity) | LboDg5McrCP | |
300 | 466 aa hypothetical protein |