Ref: Hiraide,Y. et al. Plant Cell Physiol. 56 (2), 334-345 (2015)

REBASE ref # 18982

Sequence length:GenBank #:
Chromosome: 6,176,365 bp AP014642
plasmid pLBA: 77,793 bp AP014643
plasmid pLBX: 504,942 bp AP014644

REBASE acronym: LboDg5

Org_num: 14781

 

All begin LBDG_, LBDG_A, LBDG_X

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
16750 SODM2 Superoxide dismutase
16760 S S.Lbo2135ORF49350P (100% identity) S.LboDg5ORFJP
16770 141 aa hypothetical protein
16780 72 aa conserved hypothetical protein
16790 M M.Lbo594ORF24560P (100% identity) M.LboDg5ORFJP
16800 R Lbo594ORF24560P (100% identity) LboDg5ORFJP
16810 141 aa hypothetical protein
 
39540 88 aa hypothetical protein
39550 S S.Lbo594ORF13085P (100% identity) S.LboDg5ORFEP
39560 114 aa hypothetical protein
39570 DNA polymerase beta domain-containing protein
39580 116 aa hypothetical protein
39590 DNA polymerase beta domain protein region
39600 M M.Lbo594ORF13085P (100% identity) M.LboDg5ORFEP
39610 378 aa conserved hypothetical protein
39620 R Lbo594ORF13085P (100% identity) LboDg5ORFEP
39630 352 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
18080 172 aa hypothetical protein
??? M M.Lbo594ORF23910P (100% identity) AGCT M.LboDg5ORFIP
18100 1406 aa hypothetical protein
 
19790 101 aa hypothetical protein
19800 M M.LboCZ1ORF5170P (100% identity) GATC M.LboDg5ORFHP
19810 ABC-type multidrug transport system, permease
 
24560 deoxyribose-phosphate aldolase
24570 M M.Lbo594ORF20665P (100% identity) M.LboDg5ORFGP
24580 geranylgeranyl reductase
 
31590 97 aa hypothetical protein
31600 M M.Lbo594ORF17135P (100% identity) TCTAGA M.LboDg5ORFFP
31610 160 aa hypothetical protein
 
47120 159 aa hypothetical protein
47130 M M.Lbo594ORF8735P (100% identity) TCCGGA M.LboDg5ORF47130P
47140 402 aa hypothetical protein
 
50260 66 aa hypothetical protein
??? M M.Lbo2135ORF14200P (100% identity) CGATCG M.LboDg5ORFDP
50280 SufE protein probably involved in Fe-S center
 
plasmid pLBA
 
270 254 aa hypothetical protein
??? M M.Lbo594ORF10595P (100% identity) CCCGGG M.LboDg5ORFAP
280 integrase-recombinase protein
 
630 129 aa hypothetical protein
640 M M.Lbo594ORF10280P (100% identity) M.LboDg5ORFBP
650 268 aa hypothetical protein
 
plasmid pLBX
 
950 90 aa hypothetical protein
960 M M.Lbo594ORF33125P (100% identity) M.LboDg5ORFCP
970 Cell division protein FtsH
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
33070 82 aa hypothetical protein
??? R Lbo594MrrP (100% identity) LboDg5MrrP
33100 RNA-metabolising metallo-beta-lactamase
 
plasmid pLBX
 
280 restriction enzyme
290 R Lbo2135McrCP (100% identity) LboDg5McrCP
300 466 aa hypothetical protein
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