Ref: Hiraide,Y. et al. Plant Cell Physiol. 56 (2), 334-345 (2015)

REBASE ref # 18982

Sequence length:GenBank #:
Chromosome: 6,176,364 bp AP014638
plasmid pLBA: 77,793 bp AP014639
plasmid pLBX: 504,942 bp AP014640

REBASE acronym: Lbo101

Org_num: 14780

 

All begin LBWT_, LBWT_A, LBWT_X

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
16750 SODM2 Superoxide dismutase
16760 S S.LboDg5ORFJP (100% identity) S.Lbo101ORFJP
16770 141 aa hypothetical protein
16780 72 aa conserved hypothetical protein
16790 M M.LboDg5ORFJP (100% identity) M.Lbo101ORFJP
16800 R LboDg5ORFJP (100% identity) Lbo101ORFJP
16810 141 aa hypothetical protein
 
39540 88 aa hypothetical protein
39550 S S.LboDg5ORFEP (100% identity) S.Lbo101ORFEP
39560 114 aa hypothetical protein
39570 DNA polymerase beta domain-containing protein
39580 116 aa hypothetical protein
39590 DNA polymerase beta domain protein region
39600 M M.LboDg5ORFEP (100% identity) M.Lbo101ORFEP
39610 378 aa conserved hypothetical protein
39620 R LboDg5ORFEP (100% identity) Lbo101ORFEP
39630 352 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
18080 172 aa hypothetical protein
??? M M.LboDg5ORFIP (100% identity) AGCT M.Lbo101ORFIP
18100 1406 aa hypothetical protein
 
19790 101 aa hypothetical protein
19800 M M.LboDg5ORFHP (100% identity) GATC M.Lbo101ORFHP
19810 ABC-type multidrug transport system, permease
 
24560 deoxyribose-phosphate aldolase
24570 M M.LboDg5ORFGP (100% identity) M.Lbo101ORFGP
24580 geranylgeranyl reductase
 
31590 97 aa hypothetical protein
31600 M M.LboDg5ORFFP (100% identity) TCTAGA M.Lbo101ORFFP
31610 160 aa hypothetical protein
 
47120 159 aa hypothetical protein
47130 M M.LboDg5ORF47130P (100% identity) TCCGGA M.Lbo101ORF47130P
47140 402 aa hypothetical protein
 
50260 66 aa hypothetical protein
??? M M.LboDg5ORFDP (100% identity) CGATCG M.Lbo101ORFDP
50280 SufE protein probably involved in Fe-S center
 
plasmid pLBA
 
270 254 aa hypothetical protein
??? M M.LboDg5ORFAP (100% identity) CCCGGG M.Lbo101ORFAP
280 integrase-recombinase protein
 
630 129 aa hypothetical protein
640 M M.LboDg5ORFBP (100% identity) M.Lbo101ORFBP
650 268 aa hypothetical protein
 
plasmid pLBX
 
950 90 aa hypothetical protein
960 M M.LboDg5ORFCP (100% identity) M.Lbo101ORFCP
970 Cell division protein FtsH
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
33070 82 aa hypothetical protein
??? R LboDg5MrrP (100% identity) Lbo101MrrP
33100 RNA-metabolising metallo-beta-lactamase
 
plasmid pLBX
 
280 restriction enzyme
290 R LboDg5McrCP (100% identity) Lbo101McrCP
300 466 aa hypothetical protein