Ref: Seib,K.L. et al. unpublished

REBASE ref # 18859

Complete sequence: 2,324,822 bp

GenBank #: CP007668

REBASE acronym: Nme579

Org_num: 6786

 

All begin M0579_

Type I
ORF Gene Most similar Specificity Name
 
1733 ADP-L-glycero-D-manno-heptose-6-epimerase
1734 M M.NmeA710ORF931P (100% identity) M.Nme579ORF1734P
1735 30 aa hypothetical protein
??? S S.Ngos1291ORF7750P (64% identity) S.Nme579ORF1734P
1740 R NmeA710ORF931P (99% identity) Nme579ORF1734P
1741 ATP-dependent Clp protease ATP-binding subunit
 
2047 Uracil-DNA glycosylase
??? M M.Nme8669ORFAP (87% identity) M.Nme579ORF2048P
2051 46 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
326 Alanine--tRNA ligase
327 R Nme8669ORF1187P (100% identity) GCGCGC Nme579ORF328P
328 M M.NmeS4ORFCP (100% identity) GCGCGC M.Nme579ORF328P
329 Tellurite resistance protein tehA
 
916 UDP-glucose 4-epimerase
917 M Modification methylase HaeIII GGTGA M2.Nme579ORF916P
918 757 aa hypothetical protein
 
1155 hypothetical protein
??? C C.NmeW135ORF2552P (100% identity) C.Nme579IIIP
1156 R NmeSI (100% identity) AGTACT Nme579IIIP
??? M M.NmeW135ORF2552P (100% identity) AGTACT M.Nme579III
1158 ATP-dependent RNA helicase HrpA
 
1276 Leucine--tRNA ligase
1277 R NmeBS847ORFAP (100% identity) GATC Nme579ORF1277P
1278 Leucine--tRNA ligase
 
1632 Phenylalanine--tRNA ligase alpha subunit
1633 M M1.NmeMC58IIP (100% identity) GACGC M1.Nme579IVP
1634 489 aa hypothetical protein
1635 M M2.NmeMC58II (100% identity) GACGC M2.Nme579IV
1636 Phenylalanine--tRNA ligase beta subunit
 
1633 Modification methylase HaeIII
1634 R NmeMC58IIP (100% identity) GACGC Nme579ORF1633P
1635 methylase
 
1730 Bifunctional protein hldE
1731 M Modification methylase HpaII CCAGA M.Nme579ORF1731P
1732 R NmeS4ORFEP (98% identity) CCAGA Nme579ORF1731P
1733 ADP-L-glycero-D-manno-heptose-6-epimerase
 
2103 3-isopropylmalate dehydratase small subunit 1
2104 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme579ORF2104P
2105 R NmeMC58ORF1033P (100% identity) GGNNCC Nme579ORF2104P
2106 3-isopropylmalate dehydrogenase
 
2141 Ribonucleoside-diphosphate reductase 1 subunit
2142 R NmeMC58ORF1290P (100% identity) CCWGG Nme579ORF2143P
2143 M M.NmeMC58ORF1290P (100% identity) CCWGG M.Nme579ORF2143P
2144 Ribonucleoside-diphosphate reductase 1 subunit
Type III
ORF Gene Most similar Specificity Name
 
16 tRNA pseudouridine synthase B
17 M M.Nme579ORF99P (100% identity) ACACC M.Nme579II
18 R Nme579ORF99P (100% identity) ACACC Nme579IIP
19 L-lactate dehydrogenase [cytochrome]
 
98 tRNA pseudouridine synthase B
99 M M.Nme579II (100% identity) ACACC M.Nme579ORF99P
100 R Nme579IIP (100% identity) ACACC Nme579ORF99P
101 L-lactate dehydrogenase [cytochrome]
 
1778 General stress protein CTC
1779 M M.Nme12163ORF549P (98% identity) CCAGC M.Nme579I
1780 R Nme12163ORF549P (99% identity) CCAGC Nme579IP
1781 D-alanyl-D-alanine carboxypeptidase dacC
 
2114 tRNA 2-thiocytidine biosynthesis protein TtcA
2115 R Nme8669ORF1516P (100% identity) Nme579ORF2116P
2116 M M.NmeA710ORF1383P (100% identity) M.Nme579ORF2116P
2117 Peptidyl-prolyl cis-trans isomerase A precursor