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Putative Yersinia pseudotuberculosis 1 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 19725
Complete sequence: 4,728,337 bp
GenBank #: CP009786
REBASE acronym: Yps1
Org_num: 14783
All begin BZ23_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
14 | 40 aa hypothetical protein | |||
15 | R | YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | Yps1IIP |
16 | S | S.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | S.Yps1II |
17 | M | M.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | M.Yps1II |
18 | peptidase M48 family protein | |||
3509 | 240 aa hypothetical protein | |||
3510 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | Yps1IP |
3511 | virulence RhuM family protein | |||
3512 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.Yps1I |
3513 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.Yps1I |
3514 | type I restriction modification DNA specificity | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
334 | exonuclease family protein | |||
335 | M | M.YpsMD67ORF59P (100% identity) | GATC | M.Yps1ORF335P |
336 | bacteriophage replication protein | |||
683 | 77 aa hypothetical protein | |||
684 | M | M.Ysi228ORF14325P (98% identity) | GATC | M.Yps1ORF684P |
685 | 38 aa hypothetical protein | |||
688 | phage antitermination Q family protein | |||
689 | M | M.Yps6904ORF1333P (79% identity) | M.Yps1ORF689P | |
690 | 143 aa hypothetical protein | |||
1409 | C-5 cytosine-specific DNA methylase domain | |||
1410 | M | M.YpsM89ORF15220P (100% identity) | GATC | M.Yps1ORF1410P |
1411 | exonuclease family protein | |||
3366 | ribulose-phosphate 3-epimerase | |||
3367 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps1DamP |
3368 | sporulation related domain protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3507 | transposase IS200 like family protein | |||
3508 | R | YpsYpse1MrrP (100% identity) | Yps1MrrP | |
3509 | 240 aa hypothetical protein |