Escherichia coli 1303 |
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Putative Escherichia coli 1303 RM systems
Ref: Leimbach,A. et al. unpublished
REBASE ref # 19558
| Sequence length: | GenBank #: | |
| Chromosome: | 4,948,797 bp | CP009166 |
| plasmid p1303_109: | 108,501 bp | CP009167 |
| plasmid p1303_95: | 94,959 bp | CP009168 |
REBASE acronym: Eco1303
Org_num: 14719
All begin EC1303_109p, EC1303_95p, EC1303_c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8770 | SprT-like family protein | |||
| 8780 | R | EcoSTEC639ORF18270P (100% identity) | Eco1303ORF8810P | |
| 8790 | RNase III inhibitor | |||
| 8800 | S | S.EcoSTEC639ORF18270P (100% identity) | S.Eco1303ORF8810P | |
| 8810 | M | M.EcoSTEC639ORF18270P (100% identity) | M.Eco1303ORF8810P | |
| 8820 | 81 aa hypothetical protein | |||
| 38260 | SIR2-like domain protein | |||
| 38270 | S | S.EcoECB1ORF9045P (99% identity) | S.Eco1303ORF38280P | |
| 38280 | M | M.SspZ54ORF5015P (99% identity) | M.Eco1303ORF38280P | |
| 38290 | R | Eco8SOC05ORF4105P (99% identity) | Eco1303ORF38280P | |
| 38300 | 110 aa hypothetical protein | |||
| 44910 | aldehyde reductase, NADPH-dependent, | |||
| 44930 | R | EcoYPE3ORF20380P (99% identity) | Eco1303ORF44950P | |
| 44940 | S | S.EcoPC2ORF20075P (100% identity) | S.Eco1303ORF44950P | |
| 44950 | M | M.EcoMB20ORF19675P (100% identity) | M.Eco1303ORF44950P | |
| 44960 | restriction methylase | |||
| 45330 | toxic peptide regulated by antisense sRNA symR | |||
| 45340 | S | S.EcoYPE10ORF21230P (100% identity) | S.Eco1303ORF45350P | |
| ??? | M | M.EcoYPE10ORF21230P (100% identity) | M.Eco1303ORF45350P | |
| 45360 | IS3 transposase A | |||
| 45370 | IS3 transposase B | |||
| 45380 | R | type I restriction enzyme R N terminus family | Eco1303ORF45350P | |
| 45390 | 550 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12350 | exclusion protein | |||
| 12360 | M | M.EcoKG10ORF13860P (100% identity) | M.Eco1303ORF12360P | |
| 12370 | 60 aa hypothetical protein | |||
| 21250 | amino acid exporter for phenylalanine, | |||
| 21260 | V | V.SsoSE61DcmP (100% identity) | V.Eco1303DcmP | |
| 21270 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco1303DcmP |
| 21280 | HD superfamily phosphohydrolase | |||
| 34070 | global DNA-binding transcriptional dual | |||
| 34080 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco1303ORF34080P |
| 34090 | membrane protein | |||
| 35320 | D-ribulose-5-phosphate 3-epimerase | |||
| 35330 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1303DamP |
| 35340 | cell division protein that binds to the septal | |||
| 45920 | uncharacterized protein | |||
| 45930 | M | M.EcoSC101ORFHP (100% identity) | GATC | M.Eco1303ORF45930P |
| 45940 | RecA-mediated autopeptidase | |||
| 45990 | 67 aa hypothetical protein | |||
| 46000 | M | M.EcoSC101ORFGP (100% identity) | M.Eco1303ORF46000P | |
| 46010 | phage lysis protein | |||
| plasmid p1303_109 | ||||
| 540 | 101 aa hypothetical protein | |||
| 550 | M | M.SflN92ORF24820P (100% identity) | M.Eco1303ORF550P | |
| 560 | 73 aa hypothetical protein | |||
| plasmid p1303_95 | ||||
| 1140 | lipoprotein | |||
| 1170 | M | M.Sen9102ORF23126P (99% identity) | M.Eco1303ORF1170P | |
| 1180 | recombination associated protein of RdgC family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 44960 | restriction methylase | |||
| 44970 | R | EcoYPE3McrBP (100% identity) | Eco1303McrBP | |
| 44980 | 5-methylcytosine-specific restriction enzyme | |||
| 44970 | 5-methylcytosine-specific restriction enzyme | |||
| 44980 | R | EcoYPE3McrCP (100% identity) | Eco1303McrCP | |
| 44990 | restriction endonuclease | |||