Escherichia coli 789 |
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Putative Escherichia coli 789 RM systems
Ref: Huja,S. et al. MBio 6 (1), e01681-14 (2015)
REBASE ref # 18915
Complete sequence: 5,017,219 bp
GenBank #: CP010315
REBASE acronym: Eco789
Org_num: 14674
All begin AC789_1c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20990 | 254 aa hypothetical protein | |||
| 21000 | R | EcoTX1999ORF2159P (100% identity) | Eco789ORF21020P | |
| 21010 | S | S.EcoTX1999ORF2159P (92% identity) | S.Eco789ORF21020P | |
| 21020 | M | M.EcoSTEC346ORFGP (100% identity) | M.Eco789ORF21020P | |
| 21030 | 380 aa hypothetical protein | |||
| 48060 | protein YjiW | |||
| 48070 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco789ORF48080P |
| 48080 | M | M.Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | M.Eco789ORF48080P |
| 48090 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco789ORF48080P |
| 48100 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5520 | 64 aa hypothetical protein encoded by prophage | |||
| 5530 | M | M.EcosE1ORFAP (100% identity) | M.Eco789ORF5530P | |
| 5540 | 91 aa hypothetical protein encoded by prophage | |||
| 17410 | 75 aa hypothetical protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco789ORFAP | |
| 17430 | prophage protein | |||
| 21660 | carboxylate/amino acid/amine transporter | |||
| ??? | V | V.SflSTLE3DcmP (100% identity) | V.Eco789DcmP | |
| 21680 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco789DcmP |
| 21690 | hydrolase | |||
| 36250 | DNA-binding protein fis, factor-for- inversion | |||
| 36260 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco789ORF36260P |
| 36270 | membrane protein YhdU | |||
| 37550 | D-ribulose-5-phosphate 3-epimerase | |||
| 37560 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco789DamP |
| 37570 | membrane protein; interferes with cell division | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 48040 | R | Ssp28760McrCP (100% identity) | Eco789McrCP | |
| 48050 | R | EcoSTEC346McrBP (100% identity) | Eco789McrBP | |
| 48060 | protein YjiW | |||
| 48090 | endonuclease R | |||
| 48100 | R | Ssp28760MrrP (100% identity) | Eco789MrrP | |
| 48110 | cobalamin synthesis protein YjiA | |||