Salmonella enterica subsp. enterica serovar Paratyphi A strain CMCC 50503 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi A strain CMCC 50503 RM systems
Ref: Wang,B. et al. unpublished
REBASE ref # 18899
Complete sequence: 4,612,373 bp
GenBank #: CP009559
REBASE acronym: Sen50503
Org_num: 41925
All begin LW89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4260 | restriction endonuclease | |||
| 4265 | R | SptAIIIP (100% identity) | GAANNNNNNNNTCGC | Sen50503ORF4270P |
| 4270 | M | M.SptAIII (100% identity) | GAANNNNNNNNTCGC | M.Sen50503ORF4270P |
| 4275 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen50503ORF4270P |
| 4280 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4565 | phage polarity suppression protein | |||
| 4570 | R | SptAIP (100% identity) | CAGCTG | Sen50503ORF4575P |
| ??? | C | C.SptAI (100% identity) | C.Sen50503ORF4575P | |
| 4575 | M | M.SptAI (100% identity) | CAGCTG | M.Sen50503ORF4575P |
| 4580 | integrase | |||
| 9305 | cell division protein DamX | |||
| 9310 | M | M.SptADamP (100% identity) | GATC | M.Sen50503DamP |
| 9315 | ribulose-phosphate 3-epimerase | |||
| 9790 | membrane protein | |||
| 9795 | M | M.SptAORF3253P (100% identity) | ATGCAT | M.Sen50503ORF9795P |
| 9800 | Fis family transcriptional regulator | |||
| 12995 | 76 aa hypothetical protein | |||
| 13000 | M | M.SptAORF2624P (100% identity) | M.Sen50503ORF13000P | |
| 13005 | replication protein A | |||
| 22020 | multidrug DMT transporter | |||
| 22025 | V | V.StyUK1DcmP (100% identity) | V.Sen50503DcmP | |
| 22030 | M | M.SptADcm (100% identity) | CCWGG | M.Sen50503DcmP |
| 22035 | hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14445 | sugar transporter | |||
| 14450 | M | M.SptAII (100% identity) | CAGAG | M.Sen50503ORF14450P |
| 14455 | R | SptAIIP (100% identity) | CAGAG | Sen50503ORF14450P |
| 14460 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4255 | membrane protein | |||
| 4260 | R | SptAMrrP (100% identity) | Sen50503MrrP | |
| 4265 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13190 | 3-5 exonuclease | |||
| 13195 | M | M.StyTORF4329P (100% identity) | M.Sen50503ORF13195P | |
| 13200 | endonuclease | |||