Campylobacter lari CCUG 22395 |
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Putative Campylobacter lari CCUG 22395 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,523,028 bp
GenBank #: CP007776
REBASE acronym: Cla22395
Org_num: 14649
All begin UPTC4110_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 338 | zinc-dependent alcohol dehydrogenase | |||
| 339 | R | Cla21009ORF344P (98% identity) | Cla22395ORF343P | |
| 340 | 1017 aa hypothetical protein, RloD family | |||
| 341 | S | S.Cco502ORF7735P (64% identity) | S.Cla22395ORF343P | |
| 342 | Fic domain protein | |||
| 343 | M | M.ClaSCHS02ORF1845P (98% identity) | M.Cla22395ORF343P | |
| 344 | 182 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32 | translation initiation factor IF-3 | |||
| 33 | M | M.ClaSBORF170P (99% identity) | GAATTC | M.Cla22395ORF33P |
| 34 | 50S ribosomal protein L35 | |||
| 222 | 140 aa hypothetical protein (DUF150 domain) | |||
| 223 | R | Csu24377IIP (99% identity) | CCTC | Cla22395ORF224P |
| 224 | M | M1.Csu24377IIP (99% identity) | CCTC | M1.Cla22395ORF224P |
| 225 | M | M2.Csu24377II (99% identity) | CCTC | M2.Cla22395ORF224P |
| 226 | McrBC 5-methylcytosine restriction system, component McrC | |||
| 845 | reverse transcriptase | |||
| 846 | RM | Csu24377ORF1026P (78% identity) | Cla22395ORF846P | |
| 847 | ATPase, AAA family | |||
| 1430 | membrane protein | |||
| 1431 | RM | Cla21009ORF1402P (87% identity) | Cla22395ORF1431P | |
| 1433 | hypothetical protein | |||
| 1548 | ATPase, AAA family | |||
| 1549 | M | M.Cje92ORF8345P (100% identity) | GGCC | M.Cla22395ORF1549P |
| 1550 | R | Cje92ORF8345P (100% identity) | GGCC | Cla22395ORF1549P |
| 1551 | 153 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1346 | lipid A disaccharide synthase | |||
| 1347 | R | Cla12894ORF1361P (97% identity) | Cla22395ORF1350P | |
| 1348 | nucleotidyl transferase domain protein | |||
| 1349 | 170 aa hypothetical protein | |||
| 1350 | M | M.CjeCJ031ORF1235P (83% identity) | M.Cla22395ORF1350P | |
| 1351 | cytolethal distending toxin, subunit CdtC | |||