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Putative Campylobacter lari NCTC 11845 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,791,508 bp
GenBank #: CP007775
REBASE acronym: Cla11845
Org_num: 14648
All begin UPTC3659_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
361 | 122 aa hypothetical protein | |||
362 | M | M.Csp8ORF7845P (91% identity) | M.Cla11845ORF362P | |
??? | 206 aa hypothetical protein | |||
362 | type I restriction/modification system, M | |||
??? | S | S.Cje105ORF5305P (46% identity) | S.Cla11845IV | |
??? | S | S.Cje105ORF5305P (47% identity) | S2.Cla11845IV | |
364 | 533 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
34 | translation initiation factor IF-3 | |||
35 | M | M.Cla11937ORF39P (99% identity) | RAATTY | M.Cla11845I |
36 | transcriptional regulator (WYL domain) | |||
641 | 225 aa hypothetical protein | |||
642 | M | M.Car73571ORF612P (95% identity) | M.Cla11845ORF642P | |
643 | 58 aa hypothetical protein | |||
1607 | 181 aa hypothetical protein | |||
1608 | M | M.Cla16701ORF1365P (96% identity) | GATC | M.Cla11845II |
1609 | carbamoylphosphate synthase, large subunit | |||
1666 | 708 aa hypothetical protein (AAA domain) | |||
1667 | RM | ClaSBORF7380P (96% identity) | GCGAA | Cla11845III |
1669 | pseudogene | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
241 | 140 aa hypothetical protein (DUF150 domain) | |||
242 | R | Cla11937McrBP (100% identity) | Cla11845McrBP | |
243 | R | Cla11937McrCP (100% identity) | Cla11845McrCP | |
244 | diaminohydroxyphosphoribosylaminopyrimidine |