Campylobacter subantarcticus LMG 24377 |
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Putative Campylobacter subantarcticus LMG 24377 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,852,995 bp
GenBank #: CP007773
REBASE acronym: Csu24377
Org_num: 14646
All begin CSUB8523_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 356 | DNA helicase (AAA domain) | |||
| 357 | R | Csu24374IIP (98% identity) | Csu24377ORF362P | |
| 358 | hydrolase (metallo-beta-lactamase | |||
| 359 | 192 aa hypothetical protein | |||
| 360 | S | S.Cno441bORF1431P (57% identity) | S.Csu24377ORF362P | |
| 361 | Fic domain protein | |||
| 362 | M | M.Csp216ORF1850P (99% identity) | M.Csu24377ORF362P | |
| 363 | molybdopterin molybdenumtransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27 | translation initiation factor IF-3 | |||
| 28 | M | M.Cla218ORF5705P (95% identity) | RAATTY | M.Csu24377I |
| 29 | transcriptional regulator (WYL domain) | |||
| 44 | SAM-dependent methyltransferase | |||
| 45 | RM | CjeC72ORF1135P (90% identity) | Csu24377ORF45P | |
| 46 | dihydroorotase, homodimeric type | |||
| 103 | imidazoleglycerol-phosphate dehydratase / | |||
| 104 | M | M1.Csu24374ORF110P (100% identity) | GATC | M1.Csu24377ORF104P |
| 105 | M | M.Cla00ORF520P (98% identity) | GATC | M2.Csu24377ORF104P |
| 106 | imidazole glycerol phosphate synthase HisFH, | |||
| 225 | 140 aa hypothetical protein (DUF150 domain) | |||
| 226 | R | Cla22395ORF224P (99% identity) | CCTC | Csu24377IIP |
| 227 | M | M1.Cla22395ORF224P (99% identity) | CCTC | M1.Csu24377IIP |
| 228 | M | M2.Cla22395ORF224P (99% identity) | CCTC | M2.Csu24377II |
| 229 | McrBC 5-methylcytosine restriction system, component McrC | |||
| 976 | 95 aa hypothetical protein | |||
| 977 | M | M.Csu24374ORF944P (100% identity) | M.Csu24377ORF972P | |
| 978 | phage virion morphogenesis protein | |||
| 1025 | 197 aa hypothetical protein | |||
| 1026 | RM | Cla22395ORF846P (78% identity) | Csu24377ORF1026P | |
| 1027 | ATPase, AAA family | |||
| 1624 | type II restriction endonuclease | |||
| 1625 | RM | type II restriction endonuclease subunit M | Csu24377ORF1625P | |
| 1626 | Sel1 domain repeat-containing protein | |||
| 1743 | membrane protein | |||
| 1744 | RM | ClaSCHS02ORF4165P (96% identity) | Csu24377ORF1744P | |
| 1745 | molybdopterin-containing oxidoreductase II, | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1553 | ribose-phosphate diphosphokinase | |||
| 1554 | M | M.Csu24374ORF1458P (100% identity) | M.Csu24377ORF1554P | |
| 1555 | R | Csu24374ORF1458P (99% identity) | Csu24377ORF1554P | |
| 1556 | pseudogene | |||
| 1652 | lipid A disaccharide synthase | |||
| 1653 | R | Cla12894ORF1361P (94% identity) | Csu24377ORF1655P | |
| 1654 | 306 aa hypothetical protein | |||
| 1655 | M | M.Cje11925ORF300P (91% identity) | M.Csu24377ORF1655P | |
| 1656 | arsenite-transporting ATPase | |||
| 1880 | recombination factor protein RarA | |||
| 1882 | R | Cla11760ORF1519P (97% identity) | Csu24377ORF1883P | |
| 1883 | M | M.Csp216ORF120P (61% identity) | M.Csu24377ORF1883P | |
| 1884 | 206 aa hypothetical protein (DUF305 domain) | |||