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Putative Campylobacter insulaenigrae NCTC 12927 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,465,081 bp
GenBank #: CP007770
REBASE acronym: Cin12927
Org_num: 14643
All begin CINS_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3 | DNA gyrase, subunit B | |||
4 | M | M.Cin12927SII (100% identity) | ACNGT | M.Cin12927ORF4P |
5 | R | Cin12927SIIP (100% identity) | ACNGT | Cin12927ORF4P |
6 | adenosine deaminase | |||
29 | translation initiation factor IF-3 | |||
30 | R | Cin12927SIP (100% identity) | RAATTY | Cin12927ORF30P |
31 | adenine-specific DNA methyltransferase (EcoRI | |||
30 | type II restriction endonuclease, EcoRI family | |||
31 | M | M.Cin12927SI (100% identity) | RAATTY | M.Cin12927ORF31P |
32 | 50S ribosomal protein L35 | |||
42 | DNA methyltransferase | |||
43 | R | Cin12927SIIIP (100% identity) | CCTTC | Cin12927ORF42P |
44 | M | M.Cin12927SIII (100% identity) | CCTTC | M.Cin12927ORF42P |
45 | DNA methyltransferase | |||
478 | membrane protein | |||
??? | RM | Cin12927SORF486P (100% identity) | Cin12927ORF480P | |
481 | protein disulfide oxidoreductase | |||
849 | 94 aa hypothetical protein | |||
850 | M | M.Cin12927SORF865P (100% identity) | M.Cin12927ORFAP | |
851 | phage terminase-like protein, large subunit | |||
1111 | thiamin biosynthesis protein | |||
1112 | RM | Cin12927SORF1130P (100% identity) | Cin12927ORF1112P | |
1113 | N-succinyl-diaminopimelate deacylase | |||
1234 | RecD-like DNA helicase (AAA domain) | |||
1235 | RM | Cin12927SORF1256P (100% identity) | Cin12927ORF1235P | |
1236 | pseudogene | |||
1504 | molybdenum-pterin binding domain-containing | |||
1505 | RM | Cin12927SORF1529P (100% identity) | Cin12927ORF1505P | |
1506 | 139 aa hypothetical membrane protein (DUF417 domain) | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
216 | pseudogene | |||
217 | R | Cin12927SMcrBP (100% identity) | Cin12927McrBP | |
218 | R | Cin12927SMcrCP (100% identity) | Cin12927McrCP | |
219 | diaminohydroxyphosphoribosylaminopyrimidine |