Lactobacillus gasseri 130918 |
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Putative Lactobacillus gasseri 130918 RM systems
Ref: Amafuji,K. unpublished
REBASE ref # 18876
Complete sequence: 1,932,394 bp
GenBank #: CP006809
REBASE acronym: Lga130918
Org_num: 14618
All begin P906_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4225 | 334 aa hypothetical protein | |||
| 4230 | R | LpaFB017ORFFP (99% identity) | Lga130918ORF4235P | |
| 4235 | M | M.LpaFB017ORFFP (99% identity) | M.Lga130918ORF4235P | |
| 4240 | S | S2.LpaFB017ORFFP (55% identity) | S1.Lga130918ORF4235P | |
| 4245 | 114 aa hypothetical protein | |||
| 4250 | 62 aa hypothetical protein | |||
| 4255 | 108 aa hypothetical protein | |||
| ??? | S | S1.LpaFB017ORFFP (55% identity) | S2.Lga130918ORF4235P | |
| 4270 | 329 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3530 | ATPase | |||
| 3535 | RM | LpaFB017ORFEP (99% identity) | Lga130918ORF3535P | |
| 3540 | 188 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2355 | transposase | |||
| 2360 | M | M.LpaFB017ORFDP (99% identity) | M.Lga130918ORF2360P | |
| 2365 | R | LpaFB017ORFDP (91% identity) | Lga130918ORF2360P | |
| 2370 | 431 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 190 | exodeoxyribonuclease | |||
| 195 | R | LpaFB017ORFAP (100% identity) | Lga130918ORF195P | |
| 200 | pseudogene | |||