Escherichia coli 6409 |
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Putative Escherichia coli 6409 RM systems
Ref: McCorrison,J. et al. unpublished
REBASE ref # 18917
| Sequence length: | GenBank #: | |
| Chromosome: | 4,761,012 bp | CP010371 |
| plasmid p6409-151.583kb: | 151,583 bp | CP010372 |
| plasmid p6409-202.186kb: | 193,908 bp | CP010373 |
REBASE acronym: Eco6409
Org_num: 14678
All begin RR31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23030 | 58 aa hypothetical protein | |||
| 23035 | R | SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | Eco6409IP |
| 23040 | S | S.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | S.Eco6409I |
| 23045 | M | M.SflN110ORF19045P (100% identity) | CCANNNNNNNNTGAA | M.Eco6409I |
| 23050 | restriction methylase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1440 | 162 aa hypothetical protein | |||
| 1445 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco6409ORF1445P |
| 1450 | LexA family transcriptional regulator | |||
| 1485 | TrmB family transcriptional regulator | |||
| 1490 | M | M.EcosEC26ORF18080P (100% identity) | M.Eco6409ORF1490P | |
| 1495 | holin | |||
| 10320 | replication protein | |||
| 10325 | M | M.SflFF87ORF9260P (100% identity) | GATC | M.Eco6409ORF10325P |
| 10330 | 74 aa hypothetical protein | |||
| 10615 | multidrug DMT transporter | |||
| 10620 | V | V.SsoSE61DcmP (100% identity) | V.Eco6409DcmP | |
| 10625 | M | M.SflN92DcmP (100% identity) | CCWGG | M.Eco6409DcmP |
| 10630 | hydrolase | |||
| 17095 | Fis family transcriptional regulator | |||
| 17100 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco6409ORF17100P |
| 17105 | 59 aa hypothetical protein | |||
| 17720 | ribulose-phosphate 3-epimerase | |||
| 17725 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6409DamP |
| 17730 | cell division protein DamX | |||
| 21310 | phage protein | |||
| 21315 | M | M.Sso63633ORF22290P (100% identity) | M.Eco6409ORF21315P | |
| 21320 | holin | |||
| 23060 | mcrBC 5-methylcytosine restriction system | |||
| 23065 | R | SflSTLE4ORF19250P (100% identity) | Eco6409ORF23065P | |
| 23070 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| plasmid p6409-151.583kb | ||||
| 23705 | 103 aa hypothetical protein | |||
| 23710 | M | M.Ecowhn14ORF35P (100% identity) | M.Eco6409ORF23710P | |
| 23715 | 73 aa hypothetical protein | |||
| plasmid p6409-202.186kb | ||||
| 24765 | 143 aa hypothetical protein | |||
| 24770 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.Eco6409ORF24770P |
| 24775 | 100 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23050 | restriction methylase | |||
| 23055 | R | SflSTLE4McrBP (100% identity) | Eco6409McrBP | |
| 23060 | R | SflSTLE4McrCP (100% identity) | Eco6409McrCP | |
| 23065 | restriction endonuclease | |||