Escherichia coli APEC IMT5155 |
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Putative Escherichia coli APEC IMT5155 RM systems
Ref: Zhu Ge,X. et al. PLoS ONE 9 (11), E112048 (2014)
REBASE ref # 18850
Complete sequence: 4,929,051 bp
GenBank #: CP005930
REBASE acronym: Eco5155
Org_num: 4442
All begin L282_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | DNA-binding protein | |||
| 2551 | M | M.Ecos641ORF18845P (100% identity) | M.Eco5155ORF2551P | |
| 2552 | S | S.EcoWH398ORF26840P (100% identity) | S.Eco5155ORF2551P | |
| ??? | R | EcoW087ORF4400P (100% identity) | Eco5155ORF2551P | |
| 2554 | 41 aa hypothetical protein | |||
| 2777 | endoribonuclease SymE | |||
| 2778 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco5155ORF2779P |
| 2779 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.Eco5155ORF2779P |
| 2780 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco5155ORF2779P |
| 2781 | methylated adenine and cytosine restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 811 | LexA repressor-like DNA repair protein | |||
| 812 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.Eco5155ORF812P |
| 813 | 83 aa hypothetical protein | |||
| 1496 | Factor for inversion stimulation Fis, | |||
| 1497 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco5155ORF1497P |
| 1498 | 37 aa hypothetical protein | |||
| 1612 | D-ribulose-5-phosphate 3-epimerase | |||
| 1613 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco5155DamP |
| 1614 | cell division protein DamX | |||
| 3672 | DksA/TraR protein family with a zinc | |||
| 3673 | M | M.EcoE51ORF6525P (100% identity) | GATC | M.Eco5155ORF3673P |
| 3674 | replication protein for prophage | |||
| 4110 | hydrolase | |||
| 4111 | M | M.EcoF18DcmP (100% identity) | CCWGG | M.Eco5155DcmP |
| 4112 | V | V.EcoF18DcmP (100% identity) | V.Eco5155DcmP | |
| 4113 | DMT superfamily transporter inner membrane | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 764 | protein from DinI-like family | |||
| 765 | R | EcoDE17GmrSDP (96% identity) | Eco5155GmrSD2P | |
| 766 | 512 aa hypothetical protein | |||
| 2780 | type I restriction enzyme EcoKI subunit R | |||
| 2781 | R | EcosS1MrrP (100% identity) | Eco5155MrrP | |
| 2782 | GTP-binding protein YjiA | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4020 | recombination protein ninB from phage origin | |||
| 4021 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco5155ORF4021P |
| 4022 | protein ninx | |||