Neisseria meningitidis |
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Putative Neisseria meningitidis RM systems
Ref: Neri,A. et al. unpublished
REBASE ref # 18805
GenBank #: JPTA00000000
REBASE acronym: Nme2419
Org_num: 14514
All begin JH16_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10080 | transposase | |||
| 10085 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme2419ORF10085P |
| 10090 | R | NmeS4ORFFP (100% identity) | CCGG | Nme2419ORF10085P |
| 10095 | V | V.NmeS4ORFFP (100% identity) | V.Nme2419ORF10085P | |
| 10100 | ATP-dependent helicase | |||
| 9465 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme2419ORF9470P |
| 9470 | M | M.NmeM395I (100% identity) | CCTTC | M.Nme2419ORF9470P |
| 9475 | transposase | |||
| 10650 | 123 aa hypothetical protein | |||
| 10655 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme2419ORF10655P |
| 10660 | transposase | |||
| 5015 | M | DNA methyltransferase | GCGCGC | M.Nme2419ORF5015P |
| 5020 | R | restriction endonuclease | GCGCGC | Nme2419ORF5015P |
| 5025 | alanyl-tRNA synthetase | |||
| 8960 | transcription accessory protein | |||
| ??? | M | 5-methylcytosine methyltransferase | GGTGA | M.Nme2419ORF8965P |
| 8980 | dTDP-glucose 4,6-dehydratase | |||
| 130 | phenylalanine--tRNA ligase | |||
| 135 | V | V.NmeS4ORFGP (100% identity) | V.Nme2419ORF140P | |
| 140 | M | M.Nme961ORF1427P (100% identity) | RCCGGB | M.Nme2419ORF140P |
| 145 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme2419ORF140P |
| 150 | phenylalanyl-tRNA synthetase subunit beta | |||
| 2680 | 184 aa hypothetical protein | |||
| 2685 | M | M2.NmeS4ORFAP (100% identity) | GATC | M1.Nme2419ORF2685P |
| 2690 | M | M1.NmeS4ORFAP (99% identity) | GATC | M2.Nme2419ORF2685P |
| 2695 | leucine--tRNA ligase | |||
| 3170 | 213 aa hypothetical protein | |||
| ??? | M | M.NmeS4ORFHP (100% identity) | GGNNCC | M.Nme2419ORF3175P |
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme2419ORF3175P |
| 3200 | 3-isopropylmalate dehydrogenase | |||
| 620 | orotidine 5-phosphate decarboxylase | |||
| 630 | M | M.NmeS4ORFEP (99% identity) | CCAGA | M.Nme2419ORF630P |
| 635 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme2419ORF630P |
| 640 | ADP-L-glycero-D-manno-heptose-6-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1060 | lactate dehydrogenase | |||
| 1065 | R | NmeS4ORFDP (100% identity) | Nme2419ORF1070P | |
| ??? | M | M.Nme208I (99% identity) | M.Nme2419ORF1070P | |
| 1080 | pseudouridine synthase | |||
| 6890 | peptidylprolyl isomerase | |||
| 6895 | M | M.NmeS4ORFIP (84% identity) | M.Nme2419ORF6895P | |
| 6900 | R | NmeS4ORFIP (100% identity) | Nme2419ORF6895P | |
| 6905 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||