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Putative Salmonella enterica subsp. enterica serovar Newport str. SL254 RM systems
Ref: Ravel,J. et al. unpublished
REBASE ref #
Sequence length: | GenBank #: | |
Chromosome: | 4,827,641 bp | CP001113 (NC_011080) |
plasmid pSN254: | 176,473 bp | CP000604 (NC_009140) |
REBASE acronym: SenN
Org_num: 5016
All begin SNSL254_A, SNSL254_pSN254_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
4879 | endoribonuclease SymE | |||
4880 | S | S.SenS224ORF19910P (100% identity) | GACNNNNNNNRTCC | S.SenNORF4881P |
4881 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.SenNORF4881P |
4882 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | SenNORF4881P |
4883 | membrane protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1142 | 82 aa conserved hypothetical protein | |||
??? | M | M.SenN1543ORF17225P (100% identity) | GATC | M.SenNORF1143P |
1144 | 112 aa conserved hypothetical protein | |||
2153 | carboxylate/amino acid/amine transporter | |||
2154 | V | V.StyTDcmP (100% identity) | V.SenNDcmP | |
2155 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenNDcmP |
2156 | metal dependent phosphohydrolase | |||
2941 | replication gene A protein | |||
2942 | M | M.SenU1590ORF19885P (100% identity) | GATC | M.SenNORF2942P |
2943 | gp91 | |||
3649 | DNA-binding protein Fis | |||
3650 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenNORF3650P |
3651 | periplasmic protein | |||
3755 | ribulose-phosphate 3-epimerase | |||
3756 | M | M.StyTDamP (100% identity) | GATC | M.SenNDamP |
3757 | protein DamX | |||
plasmid pSN254 | ||||
124 | 100 aa hypothetical protein | |||
125 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M.SenNORF125P |
126 | 143 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
396 | major facilitator superfamily MFS_1 | |||
397 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.SenNORF397P |
398 | R | Ssp6947IIP (99% identity) | CAGAG | SenNORF397P |
399 | 39 aa hypothetical protein |