Helicobacter species MIT 01-6451 |
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Putative Helicobacter species MIT 01-6451 RM systems
Ref: Sheh,A. et al. unpublished
REBASE ref # 18605
GenBank #: JRMQ00000000
REBASE acronym: Hsp6451
Org_num: 14431
All begin LS65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10020 | tryptophanyl-tRNA synthetase | |||
| 10025 | R | Hsp6451ORF7710P (100% identity) | Hsp6451ORF10025P | |
| 10030 | 76 aa hypothetical protein LS65_07715 | |||
| 9175 | quaternary ammonium transporter | |||
| 9180 | M | M.Hap1501ORF4375P (91% identity) | M.Hsp6451ORF9180P | |
| 9185 | pseudogene | |||
| 9190 | S | S1.Hwi488ORF7215P (47% identity) | S.Hsp6451ORF9180P | |
| 9195 | pseudogene | |||
| 9200 | R | Hap1501ORF4375P (91% identity) | Hsp6451ORF9180P | |
| 9205 | 523 aa hypothetical protein | |||
| 7705 | glutamine synthetase | |||
| 7710 | M | M.Hsp5569ORF1720P (78% identity) | M.Hsp6451ORF7710P | |
| 7715 | S | S.Cav24591ORF1435P (52% identity) | S.Hsp6451ORF7710P | |
| 7720 | R | Hsp6451ORF10025P (100% identity) | Hsp6451ORF7710P | |
| 7725 | tryptophanyl-tRNA synthetase, partial | |||
| 4080 | 153 aa hypothetical protein | |||
| 4085 | S | S.CcoRORF1666P (27% identity) | S.Hsp6451ORF4110P | |
| 4090 | 66 aa hypothetical protein LS74_02290 | |||
| 4095 | potassium ABC transporter ATPase | |||
| 4100 | 75 aa hypothetical protein | |||
| 4105 | RelE/StbE family addiction module toxin | |||
| 4110 | M | M.Hap1501ORF8600P (95% identity) | M.Hsp6451ORF4110P | |
| 4115 | 838 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9115 | alpha-1,2-fucosyltransferase | |||
| 9120 | R | HhiYS1ORFZP (93% identity) | GTNNAC | Hsp6451ORF9125P |
| 9125 | M | M.Hsp1614ORF8520P (95% identity) | GTNNAC | M.Hsp6451ORF9125P |
| 9130 | 561 aa hypothetical protein | |||
| 9135 | 741 aa hypothetical protein | |||
| 9140 | R | Hty6810ORFAP (85% identity) | GTSAC | Hsp6451ORF9140P |
| 9145 | 103 aa hypothetical protein | |||
| 9895 | 80 aa hypothetical protein | |||
| 9900 | M | M.Hsp6451ORF6940P (100% identity) | M.Hsp6451ORF9900P | |
| 9905 | 630 aa hypothetical protein | |||
| 9985 | multidrug transporter MatE | |||
| 9990 | M | M.Hsp6451ORF6850P (100% identity) | CATG | M.Hsp6451ORF9990P |
| 10000 | 243 aa hypothetical protein | |||
| 5910 | molybdenum ABC transporter substrate-binding | |||
| 5915 | RM | 1274 aa hypothetical protein | Hsp6451ORF5915P | |
| 5920 | molybdenum-pterin-binding protein | |||
| 5960 | 180 aa hypothetical protein | |||
| 5965 | M | M.Hwi170ORF305P (85% identity) | GATC | M.Hsp6451ORF5965P |
| 5970 | HrgA protein | |||
| 5970 | HrgA protein | |||
| 5975 | M | M.Hap1501I (88% identity) | GANTC | M.Hsp6451ORF5975P |
| 5980 | HAD family hydrolase | |||
| 1005 | metallophosphoesterase | |||
| 1010 | RM | HmuST1ORF4975P (36% identity) | Hsp6451ORF1010P | |
| 1015 | membrane protein | |||
| 1750 | 502 aa hypothetical protein | |||
| 1755 | RM | HciP01DORFQP (19% identity) | Hsp6451ORF1755P | |
| 1760 | 139 aa hypothetical protein | |||
| 6840 | 243 aa hypothetical protein | |||
| 6850 | M | M.Hsp6451ORF9990P (100% identity) | CATG | M.Hsp6451ORF6850P |
| 6855 | multidrug transporter MatE | |||
| 6935 | 630 aa hypothetical protein | |||
| 6940 | M | M.Hsp6451ORF9900P (100% identity) | M.Hsp6451ORF6940P | |
| 6945 | 80 aa hypothetical protein | |||
| 2400 | GMP synthase | |||
| 2405 | M | M.Nme914ORF5150P (65% identity) | ATGCAT | M.Hsp6451ORF2405P |
| 2410 | R | Cco2899ORF6755P (59% identity) | ATGCAT | Hsp6451ORF2405P |
| 2415 | 109 aa hypothetical protein | |||
| 2785 | 152 aa hypothetical protein | |||
| 2790 | M | M1.HciP01DORFJP (78% identity) | CCATC | M1.Hsp6451ORF2790P |
| 2795 | M | M2.HciP01DORFJP (80% identity) | CCATC | M2.Hsp6451ORF2790P |
| 2800 | R | Cup736ORF1585P (73% identity) | CCATC | Hsp6451ORF2790P |
| 2810 | acetyltransferase | |||
| 2850 | 274 aa hypothetical protein | |||
| 2855 | R | HhiYS1ORFOP (93% identity) | ACNGT | Hsp6451ORF2860P |
| 2860 | M | M.HhiYS1ORFOP (75% identity) | ACNGT | M.Hsp6451ORF2860P |
| 2865 | EBSC protein | |||
| 2940 | 158 aa hypothetical protein LS73_07045 | |||
| 2945 | RM | HmuST1ORF7035P (65% identity) | Hsp6451ORF2945P | |
| 2950 | 232 aa hypothetical protein | |||
| 3160 | 149 aa hypothetical protein | |||
| ??? | RM | Hca1463ORFEP (29% identity) | Hsp6451ORF3165P | |
| 3175 | tryptophan synthase subunit beta | |||
| 3200 | 112 aa hypothetical protein LS66_05640 | |||
| 3205 | M | M.Nsu2238ORFAP (68% identity) | GAATTC | M.Hsp6451ORF3205P |
| 3210 | R | Mae843ORF8670P (71% identity) | GAATTC | Hsp6451ORF3205P |
| 3215 | 224 aa hypothetical protein | |||
| 8370 | 273 aa hypothetical protein | |||
| 8380 | RM | Hty6810ORF5280P (37% identity) | Hsp6451ORF8380CP | |
| 8385 | RM | Hsp1614ORF2475AP (79% identity) | Hsp6451ORF8380BP | |
| 8390 | RM | Hsp1614ORF2475BP (86% identity) | Hsp6451ORF8380AP | |
| 8395 | glutamyl-tRNA amidotransferase | |||
| 8725 | 336 aa hypothetical protein | |||
| 8730 | M | M.HmuST1ORF6105P (80% identity) | M.Hsp6451ORF8730P | |
| 8735 | 595 aa hypothetical protein | |||
| 8735 | 595 aa hypothetical protein | |||
| 8740 | R | Ccu8469ORF415P (87% identity) | GGNCC | Hsp6451ORF8740P |
| 8745 | ArsR family transcriptional regulator | |||
| 8900 | nucleotidyltransferase | |||
| 8910 | M | M.Hfe50ORF2160P (64% identity) | CATG | M.Hsp6451ORF8910P |
| 8915 | 205 aa hypothetical protein | |||
| 8910 | 366 aa hypothetical protein | |||
| 8915 | M | M.Hfe50ORF2159P (41% identity) | GGATG | M.Hsp6451ORF8915P |
| 8920 | endonuclease | |||
| 8915 | 205 aa hypothetical protein | |||
| 8920 | R | Hsp1616ORF5750P (86% identity) | CGWCG | Hsp6451ORF8925P |
| 8925 | M | M.Hsp1616ORF5750P (84% identity) | CGWCG | M.Hsp6451ORF8925P |
| 8935 | pseudogene | |||
| 8955 | 61 aa hypothetical protein | |||
| 8960 | R | Hsp1616ORF6685P (93% identity) | GTAC | Hsp6451ORF8965P |
| 8965 | M | M.Hty6810ORF2770P (86% identity) | GTAC | M.Hsp6451ORF8965P |
| 8970 | 238 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10445 | M | M.FnuSB060ORF7480P (12% identity) | M1.Hsp6451ORF10445P | |
| 10450 | R | Hsp5293ORF2640P (42% identity) | Hsp6451ORF10445P | |
| 10455 | M | M.Hsp5569ORF10020P (63% identity) | M2.Hsp6451ORF10445P | |
| 10260 | membrane protein | |||
| 10265 | R | Hap1501ORF8305P (97% identity) | Hsp6451ORF10270P | |
| 10270 | M | 87 aa hypothetical protein LS80_05160 | M.Hsp6451ORF10270P | |
| 6445 | 276 aa hypothetical protein | |||
| 6450 | M | M.Hfe13102ORF1625P (63% identity) | M.Hsp6451ORF6450P | |
| 6455 | R | Hfe13102ORF1625P (52% identity) | Hsp6451ORF6450P | |
| 6460 | chemotaxis protein | |||
| 2920 | 165 aa hypothetical protein | |||
| ??? | R | Hsp1616ORF1555P (60% identity) | Hsp6451ORF2930P | |
| 2935 | 2-hydroxyacid dehydrogenase | |||
| 3235 | 377 aa hypothetical protein | |||
| 3240 | M | M.HpyCA7ORF2325P (46% identity) | M.Hsp6451ORF3240P | |
| 3245 | heme iron utilization protein | |||
| 8880 | GDP-4-keto-6-deoxy-D-mannose-3, | |||
| 8885 | R | Csp10638IVP (41% identity) | Hsp6451ORF8890P | |
| 8890 | M | M.PspF0648ORF11900P (49% identity) | M.Hsp6451ORF8890P | |
| 8895 | 170 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | 838 aa hypothetical protein | |||
| 4120 | R | HheMcrCP (65% identity) | Hsp6451McrCP | |
| 4125 | R | Hsp5293McrBP (33% identity) | Hsp6451McrBP | |
| 4130 | 401 aa hypothetical protein | |||