Escherichia coli ECONIH1 |
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Putative Escherichia coli ECONIH1 RM systems
Ref: Conlan,S. et al. Sci Transl Med 6 (254), 254RA126 (2014)
REBASE ref # 19233
| Sequence length: | GenBank #: | |
| Chromosome: | 5,310,511 bp | CP009859 |
| plasmid pECO-824: | 121,385 bp | CP009860 |
| plasmid pECO-b75: | 47,560 bp | CP009861 |
| plasmid pKPC-629: | 80,186 bp | CP009862 |
REBASE acronym: EcoNIH1
Org_num: 14186
All begin ECONIH1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5525 | metal-dependent hydrolase | |||
| 5530 | R | Eco3936IP (100% identity) | YTCANNNNNNGTTY | EcoNIH1IIP |
| 5535 | Appr-1-p processing protein | |||
| 5540 | 218 aa hypothetical protein | |||
| 5545 | S | S.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | S.EcoNIH1II |
| 5550 | M | M.EcosE2ORF13465P (100% identity) | YTCANNNNNNGTTY | M.EcoNIH1II |
| 5555 | transcription factor | |||
| 10950 | metal-dependent hydrolase | |||
| 10955 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | EcoNIH1IIIP |
| 10960 | 594 aa hypothetical protein | |||
| 10965 | 227 aa hypothetical protein | |||
| 10970 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.EcoNIH1III |
| 10975 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.EcoNIH1III |
| 10980 | IS3 family transposase | |||
| 26010 | endoribonuclease SymE | |||
| 26015 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoNIH1I |
| 26020 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoNIH1I |
| 26025 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoNIH1IP |
| 26030 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1460 | 162 aa hypothetical protein | |||
| 1465 | M | M.EcoC0796ORF21595P (100% identity) | GATC | M.EcoNIH1ORF1465P |
| 1470 | LexA family transcriptional regulator | |||
| 1500 | phage protein | |||
| 1505 | M | M.EcoC0796ORF21635P (100% identity) | M.EcoNIH1ORF1505P | |
| 1510 | holin | |||
| 4885 | hypothetical protein | |||
| 4890 | M | M.SspS13ORF8710P (100% identity) | GATC | M.EcoNIH1ORF4890P |
| 4895 | endonuclease | |||
| 11240 | multidrug DMT transporter | |||
| ??? | V | V.EcoNDM5DcmP (100% identity) | V.EcoNIH1DcmP | |
| 11250 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.EcoNIH1DcmP |
| 11255 | hydrolase | |||
| 19225 | Fis family transcriptional regulator | |||
| 19230 | M | M.Ecos142ORF2405P (100% identity) | ATGCAT | M.EcoNIH1ORF19230P |
| 19235 | 59 aa hypothetical protein | |||
| 19770 | ribulose-phosphate 3-epimerase | |||
| 19775 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNIH1DamP |
| 19780 | cell division protein DamX | |||
| 23980 | 160 aa hypothetical protein | |||
| 23985 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.EcoNIH1ORF23985P |
| 23990 | LexA family transcriptional regulator | |||
| plasmid pECO-824 | ||||
| 27120 | 73 aa hypothetical protein | |||
| 27125 | M | M.Xca80ORFEP (89% identity) | M.EcoNIH1ORF27125P | |
| 27130 | tryptophan synthase subunit beta like protein | |||
| plasmid pECO-b75 | ||||
| 27290 | 92 aa hypothetical protein | |||
| 27300 | M | M.Eco0015ORF27915P (99% identity) | GATC | M.EcoNIH1ORF27300P |
| 27305 | 89 aa hypothetical protein | |||
| plasmid pKPC-629 | ||||
| 27520 | transposase | |||
| 27525 | R | YpsR1ORFAP (99% identity) | CCWGG | EcoNIH1ORF27530P |
| 27530 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoNIH1ORF27530P |
| 27535 | transposase, IS1 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26000 | R | Msa17McrC2P (100% identity) | EcoNIH1McrCP | |
| 26005 | R | SenHNK130McrBP (100% identity) | EcoNIH1McrBP | |
| 26010 | endoribonuclease SymE | |||
| 26025 | DEAD/DEAH box helicase | |||
| 26030 | R | Ssp28760MrrP (100% identity) | EcoNIH1MrrP | |
| 26035 | GTP-binding protein | |||