Treponema species OMZ 838 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Treponema species OMZ 838 RM systems
Ref: Chan,Y. et al. unpublished
REBASE ref # 18829
Complete sequence: 2,708,067 bp
GenBank #: CP009227
REBASE acronym: Tsp838
Org_num: 14154
All begin JO41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5465 | radical SAM protein | |||
| 5470 | S | S.Tsp305ORF1550P (31% identity) | S1.Tsp838ORF5485P | |
| ??? | S | S1.Tsp855ORF11435P (85% identity) | S2.Tsp838ORF5485P | |
| 5485 | M | M.Tsp855ORF11435P (98% identity) | M.Tsp838ORF5485P | |
| 5490 | 89 aa hypothetical protein | |||
| 6125 | DNA polymerase IV | |||
| ??? | R | Tsp855ORF10760P (100% identity) | Tsp838ORF6185P | |
| 6140 | toxin PIN | |||
| 6145 | RelB/DinJ family addiction module antitoxin | |||
| 6150 | S | S2.Tsp855ORF10760P (100% identity) | S1.Tsp838ORF6185P | |
| 6160 | integrase | |||
| 6165 | 89 aa hypothetical protein | |||
| 6170 | 103 aa hypothetical protein | |||
| 6175 | S | S4.Tsp855ORF10760P (100% identity) | S2.Tsp838ORF6185P | |
| ??? | S | S1.Tsp857ORF1100P (100% identity) | S3.Tsp838ORF6185P | |
| 6185 | M | M.Tsp855ORF10760P (99% identity) | M.Tsp838ORF6185P | |
| 6190 | chemotaxis protein | |||
| 6780 | peptidase M20 | |||
| 6785 | M | M.Tsp806ORF2755P (93% identity) | M.Tsp838ORF6785P | |
| 6790 | 157 aa hypothetical protein | |||
| 6795 | S | S.Tsp806ORF2755P (45% identity) | S.Tsp838ORF6785P | |
| 6800 | anticodon nuclease | |||
| 6805 | R | Yfr418IP (72% identity) | Tsp838ORF6785P | |
| 6815 | methanol dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2060 | 108 aa hypothetical protein | |||
| 2065 | M | M.Tpu846ORF9455P (67% identity) | M.Tsp838ORF2065P | |
| 2070 | 79 aa hypothetical protein | |||
| 4890 | 97 aa hypothetical protein | |||
| ??? | M | M.Tsp855ORF11990P (95% identity) | M.Tsp838ORFCP | |
| 4900 | transcriptional regulator | |||
| 5310 | hindIII restriction endonuclease | |||
| 5315 | M | M.Tsp855ORF11600P (100% identity) | AAGCTT | M.Tsp838ORF5315P |
| 5320 | 315 aa hypothetical protein | |||
| 8280 | 118 aa hypothetical protein | |||
| ??? | M | 470 aa hypothetical protein | M.Tsp838ORFAP | |
| 8290 | 89 aa hypothetical protein | |||
| 8330 | 284 aa hypothetical protein | |||
| ??? | M | M.Tsp855ORF135P (98% identity) | M.Tsp838ORFBP | |
| 8340 | 246 aa hypothetical protein | |||
| 8560 | 66 aa hypothetical protein | |||
| 8565 | M | M2.Tsp855ORF8765P (100% identity) | GATC | M1.Tsp838ORF8565P |
| 8570 | R | Tsp855ORF8765P (100% identity) | GATC | Tsp838ORF8565P |
| 8580 | M | M1.Tsp855ORF8765P (99% identity) | GATC | M2.Tsp838ORF8565P |
| 8585 | 347 aa hypothetical protein | |||
| 12720 | 246 aa hypothetical protein | |||
| 12725 | M | M.Tvi802ORF2065P (97% identity) | M.Tsp838ORF12725P | |
| 12730 | 286 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2460 | multidrug transporter MATE | |||
| ??? | R | Tsp855ORF2585P (100% identity) | Tsp838ORFDP | |
| 2470 | transposase | |||