Salmonella enterica subsp. enterica serovar Typhi str. Ty2 |
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Putative Salmonella enterica subsp. enterica serovar Typhi str. Ty2 RM systems
Ref: Deng,W. et al. J. Bacteriol. 185 (7), 2330-2337 (2003)
REBASE ref # 8006
Complete sequence: 4,791,961 bp
GenBank #: AE014613 (NC_004631)
REBASE acronym: StyT
Org_num: 3711
All begin t
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4573 | 131 aa conserved hypothetical protein | |||
| 4574 | S | S.StyCORF4883P (100% identity) | GAANNNNNNNNTCGC | S.StyTORF4575P |
| 4575 | M | M.StyCORF4883P (100% identity) | GAANNNNNNNNTCGC | M.StyTORF4575P |
| 4576 | R | StyCORF4883P (100% identity) | GAANNNNNNNNTCGC | StyTORF4575P |
| 4577 | mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 885 | 231 aa conserved hypothetical protein | |||
| 886 | M | M.StyCDcmP (100% identity) | CCWGG | M.StyTDcmP |
| 887 | V | V.StyCDcmP (100% identity) | V.StyTDcmP | |
| 888 | membrane protein | |||
| 1913 | pseudogene | |||
| 1914 | M | M.StyCORF1026P (100% identity) | M.StyTORF1914P | |
| 1915 | 174 aa conserved hypothetical bacteriophage protein | |||
| 1925 | bacteriophage protein | |||
| 1926 | M | M.StyCORF1014P (100% identity) | M.StyTORF1926P | |
| 1927 | bacteriophage protein | |||
| 3300 | Fis DNA-binding protein | |||
| 3301 | M | M.StyUK1III (100% identity) | ATGCAT | M.StyTORF3301P |
| 3302 | exported protein | |||
| 4021 | DamX protein | |||
| 4022 | M | M.StyLTDam (100% identity) | GATC | M.StyTDamP |
| 4023 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 871 | R | Senr1ORF8830P (100% identity) | StyTORF872P | |
| 872 | M | 173 aa hypothetical protein | M.StyTORF872P | |
| 874 | 57 aa hypothetical protein | |||
| 2505 | 33 aa hypothetical protein | |||
| 2506 | R | SenUJ816AORFDP (100% identity) | CAGAG | StyTORF2507P |
| 2507 | M | M.StyCORF388P (100% identity) | CAGAG | M.StyTORF2507P |
| 2508 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4576 | subunit R of type I restriction-modification | |||
| 4577 | R | StyCMrrP (100% identity) | StyTMrrP | |
| 4578 | 95 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3408 | 75 aa hypothetical protein | |||
| 3409 | M | M.StyCORF3667P (100% identity) | GATC | M.StyTORF3409P |
| 3410 | possible endonuclease | |||
| 4328 | 802 aa conserved hypothetical protein | |||
| 4329 | M | M.StyCORF4636P (100% identity) | GATC | M.StyTORF4329P |
| 4330 | exonuclease | |||