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Putative Pseudomonas species 1-7 RM systems
Ref: Tian,J. et al. Genome Announc 2 (5) (2014)
REBASE ref # 18489
GenBank #: JPRQ00000000
REBASE acronym: Psp17C
Org_num: 14133
All begin JF55_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
17095 | ATPase AAA | |||
17100 | R | Pgu31ORF1335P (99% identity) | Psp17CORF17105P | |
17105 | M | M.HaeGOM5ORF17820P (95% identity) | M.Psp17CORF17105P | |
??? | S | S.PspDV1ORF870P (51% identity) | S1.Psp17CORF17105P | |
??? | S | S.Pst19ORF20700P (39% identity) | S2.Psp17CORF17105P | |
17115 | ATP-dependent OLD family endonuclease | |||
11375 | 408 aa hypothetical protein | |||
??? | R | Pst29243ORF3940P (94% identity) | Psp17CORF11380P | |
11385 | 108 aa hypothetical protein | |||
24005 | 288 aa hypothetical protein | |||
24015 | S | S.Sku7850SORF9725P (81% identity) | S.Psp17CORF24020P | |
24020 | M | M.Sku7850SORF9725P (74% identity) | M.Psp17CORF24020P | |
24025 | 111 aa hypothetical protein | |||
6410 | 112 aa hypothetical protein | |||
6420 | R | PmeMAE1KORF4420P (98% identity) | Psp17CORF6440P | |
6425 | 214 aa hypothetical protein | |||
6430 | 234 aa hypothetical protein | |||
6435 | 227 aa hypothetical protein | |||
6440 | M | M.Psp1333ORFBP (85% identity) | M.Psp17CORF6440P | |
6445 | S | S.Pfl44ORFEP (50% identity) | S.Psp17CORF6440P | |
6450 | 554 aa hypothetical protein | |||
15735 | restriction endonuclease | |||
15740 | R | Psp3919ORF16490P (97% identity) | Psp17CORF15755P | |
??? | S | S.Pae095ORF23795P (88% identity) | S.Psp17CORF15755P | |
15750 | pseudogene | |||
15755 | M | M.PaeCH45ORF21765P (99% identity) | M.Psp17CORF15755P | |
15765 | transposon Tn21 resolvase | |||
21350 | 169 aa hypothetical protein | |||
21355 | M | M.Ppu715ORF6100P (100% identity) | M.Psp17CORF21355P | |
??? | S | S.Ppu715ORF6100P (100% identity) | S.Psp17CORF21355P | |
21370 | Fic family protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
19350 | carbamoyl phosphate synthase small subunit | |||
19355 | M | M.PweA20ORF16655P (96% identity) | GGWCC | M.Psp17CORF19355P |
19360 | R | PspDV1ORF4795P (100% identity) | Psp17CORF19355P | |
19365 | dihydrodipicolinate reductase | |||
1160 | 338 aa hypothetical protein | |||
1165 | M | M.VspI (97% identity) | ATTAAT | M.Psp17CORF1165P |
??? | R | PbaD1VP (73% identity) | ATTAAT | Psp17CORF1165P |
1180 | 100 aa hypothetical protein | |||
13875 | 525 aa hypothetical protein | |||
13880 | M | M.PaeR031ORFAP (74% identity) | M.Psp17CORF13880P | |
13885 | DNA topoisomerase III | |||
7485 | integrase | |||
7495 | RM | PspDV1ORF21245P (99% identity) | Psp17CORF7495P | |
7500 | XRE family transcriptional regulator | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
12800 | 5-oxo-L-prolinase | |||
12805 | R | Psi32246ORF995P (99% identity) | Psp17CORFAP | |
??? | M | M.Pde9ORF20010P (75% identity) | M.Psp17CORFAP | |
12820 | addiction module protein | |||
11715 | DNA methylase N-4 | |||
11720 | R | Dsp3051ORF1320P (97% identity) | Psp17CORF11715P | |
11725 | DNA repair protein | |||
19230 | 3-oxoacyl-ACP synthase | |||
19240 | R | 253 aa hypothetical protein | Psp17CORF19240P | |
7195 | glycerophosphodiester phosphodiesterase | |||
7200 | R | Pol10860ORF4496P (96% identity) | Psp17CORF7210P | |
7205 | 2-hydroxyacid dehydrogenase | |||
7210 | M | M.Pfl14440ORFAP (68% identity) | M.Psp17CORF7210P | |
7215 | 249 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
15715 | 135 aa hypothetical protein | |||
15735 | R | PaeCH45MrrP (100% identity) | Psp17CMrrP | |
15740 | Restriction endonuclease, type I, EcoRI, R |