Amycolatopsis lurida NRRL 2430 |
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Putative Amycolatopsis lurida NRRL 2430 RM systems
Ref: Kwun,M.J. and Hong,H.J. Genome Announc 2 (5) (2014)
REBASE ref # 18434
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | JFBM00000000 |
| Chromosome: | 8,987,656 bp | CP007219 |
REBASE acronym: Alu2430
Org_num: 14055
All begin BB31_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15 | pseudogene | |||
| 20 | M | M.Ake1893ORF5349P (68% identity) | M.Alu2430ORF20P | |
| 25 | 180 aa hypothetical protein | |||
| 33175 | endonuclease | |||
| 33180 | M | M.Lsp13ORF5230P (76% identity) | M.Alu2430ORF33180P | |
| 33185 | TetR family transcriptional regulator | |||
| 22890 | protein phosphatase | |||
| 22895 | M | M.AroZEL1ORF23570P (94% identity) | M.Alu2430ORF22895P | |
| 22900 | protein kinase | |||
| 33720 | 62 aa hypothetical protein | |||
| ??? | R | Alu2430ORFCP (100% identity) | CCGCGG | Alu2430ORFBP |
| 33725 | pseudogene | |||
| 6325 | serine/threonine protein kinase | |||
| 6330 | RM | Ssp31swORF2920P (67% identity) | Alu2430ORF6330P | |
| 6335 | 1273 aa hypothetical protein | |||
| 33470 | XRE family transcriptional regulator | |||
| ??? | M | M.SspZFG47ORF15500P (40% identity) | CGATCG | M.Alu2430ORFAP |
| 33475 | transcriptional regulator | |||
| Chromosome | ||||
| 15 | pseudogene | |||
| 20 | M | M.Ake1893ORF5349P (68% identity) | M.Alu2430ORF20P | |
| 25 | 180 aa hypothetical protein | |||
| 6350 | serine/threonine protein kinase | |||
| 6355 | RM | Ssp31swORF2920P (67% identity) | Alu2430ORF6330P | |
| 6360 | 1273 aa hypothetical protein | |||
| 22965 | protein phosphatase | |||
| 22970 | M | M.AroZEL1ORF23570P (94% identity) | M.Alu2430ORF22895P | |
| 22975 | protein kinase | |||
| 33210 | endonuclease | |||
| 33215 | M | M.Lsp13ORF5230P (76% identity) | M.Alu2430ORF33180P | |
| 33220 | TetR family transcriptional regulator | |||
| 33505 | XRE family transcriptional regulator | |||
| ??? | M | M.SspZFG47ORF15500P (40% identity) | CGATCG | M.Alu2430ORFAP |
| 33510 | 87 aa hypothetical protein | |||
| 33755 | 62 aa hypothetical protein | |||
| ??? | R | Alu2430ORFBP (100% identity) | CCGCGG | Alu2430ORFCP |
| 33760 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39495 | 127 aa hypothetical protein | |||
| 39500 | R | Alu2430McrC2P (100% identity) | Alu2430McrCP | |
| 39505 | R | Alu2430McrB2P (100% identity) | Alu2430McrBP | |
| 39510 | pseudogene | |||
| Chromosome | ||||
| 39525 | 148 aa hypothetical protein | |||
| 39530 | R | Alu2430McrCP (100% identity) | Alu2430McrC2P | |
| 39535 | R | Alu2430McrBP (100% identity) | Alu2430McrB2P | |
| 39540 | pseudogene | |||