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Putative Mycoplasma species VCU_M1 RM systems
Ref: Fettweis,J.M. et al. PLoS ONE 9 (10), E110943 (2014)
REBASE ref # 18513
Complete sequence: 618,983 bp
GenBank #: CP007711
REBASE acronym: MspM1
Org_num: 14012
All begin MGM1_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1000 | 50S ribosomal protein L17 | |||
1010 | S | S2.MgiB3ORF490P (75% identity) | S.MspM1ORF1010P | |
1020 | enolase | |||
1880 | GTP-binding protein Era | |||
1890 | S | type I restriction modification DNA specificity | S.MspM1ORF1890P | |
1900 | DNA repair protein RecO | |||
2560 | L-serine dehydratase | |||
2580 | S | S.MspM1ORF1890P (80% identity) | S.MspM1ORF2580P | |
2590 | endonuclease IV | |||
3940 | 316 aa hypothetical protein | |||
3950 | S | S.MmyC264ORF2140P (23% identity) | S.MspM1ORF3950P | |
3970 | pseudogene | |||
4890 | deoxyguanosine kinase | |||
4910 | M | type I restriction modification system DNA | M.MspM1ORF4910P | |
4920 | S | type I restriction modification DNA specificity | S1.MspM1ORF4910P | |
4930 | S | type I restriction modification DNA specificity | S2.MspM1ORF4910P | |
4940 | R | type I site-specific deoxyribonuclease | MspM1ORF4910P | |
4950 | HD domain-containing phosphohydrolase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
580 | N-acetylglucosamine-6-phosphate deacetylase | |||
590 | S | S.MgiB3ORF60P (55% identity) | S.MspM1ORF600P | |
600 | RM | MgiB3ORF60P (98% identity) | MspM1ORF600P | |
610 | anaerobic ribonucleoside-triphosphate reductase | |||
1470 | 50S ribosomal protein L11 | |||
1480 | M | M.MgiB3ORF207P (99% identity) | GANTC | M.MspM1ORF1480P |
1490 | R | MgiB3ORF207P (98% identity) | GANTC | MspM1ORF1480P |
1500 | rubrerythrin | |||
4970 | GTP-binding protein LepA | |||
5010 | R | MgiB3ORF501P (100% identity) | GATC | MspM1ORF5020P |
5020 | M | M.MgiB3ORF501P (100% identity) | GATC | M.MspM1ORF5020P |
5030 | rubredoxin | |||
5840 | 180 aa hypothetical protein | |||
5850 | M | M.FnuDII (78% identity) | CGCG | M.MspM1ORF5850P |
5870 | R | Fnu1330ORF955P (68% identity) | CGCG | MspM1ORF5850P |
5860 | 464 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1960 | desulfoferrodoxin | |||
1970 | R | MgiB3ORF157P (99% identity) | MspM1ORF1980P | |
1980 | M | type III restriction-modification system | M.MspM1ORF1980P | |
1990 | 151 aa hypothetical protein |