Novosphingobium pentaromativorans US6-1 |
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Putative Novosphingobium pentaromativorans US6-1 RM systems
Ref: Choi,D.H. and Kim,S.J. unpublished
REBASE ref # 20888
Complete sequence: 3,979,506 bp
GenBank #: CP009291
REBASE acronym: NpeUS61
Org_num: 8012
All begin JI59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7425 | 715 aa hypothetical protein | |||
| 7430 | R | PinM647ORF10970P (93% identity) | NpeUS61ORF2528P | |
| 7435 | S | S.RspS88ORF18215P (56% identity) | S.NpeUS61ORF2528P | |
| ??? | M | M.PinM647ORF10970P (83% identity) | M.NpeUS61ORF2528P | |
| 7445 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2545 | 232 aa hypothetical protein | |||
| 2550 | M | M.NspPP1YORF28066P (99% identity) | GANTC | M.NpeUS61I |
| 2555 | dihydropteroate synthase | |||
| 4335 | 136 aa hypothetical protein | |||
| 4345 | M | M.SspIC081ORF17575P (84% identity) | M.NpeUS61ORF3120P | |
| 4350 | capsid portal protein | |||
| 5220 | DEAD/DEAH box helicase | |||
| 5225 | RM | CspEry5ORFCP (98% identity) | GATCGAC | NpeUS61II |
| 5230 | 59 aa hypothetical protein | |||
| 16460 | 217 aa hypothetical protein | |||
| 16465 | M | M.NpeUS61ORF283P (88% identity) | GATC | M.NpeUS61ORF730P |
| 16470 | 167 aa hypothetical protein | |||
| 18700 | 218 aa hypothetical protein | |||
| 18705 | M | M.NpeUS61ORF730P (88% identity) | GATC | M.NpeUS61ORF283P |
| 18710 | 168 aa hypothetical protein | |||