Salmonella enterica subsp. enterica serovar Newport CVM 21554 |
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Putative Salmonella enterica subsp. enterica serovar Newport CVM 21554 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 17577
Complete sequence: 4,726,694 bp
GenBank #: CP009565
REBASE acronym: Sen21554
Org_num: 13891
All begin SEEN554_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13740 | pseudogene | |||
| 13745 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen21554IIP |
| 13750 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen21554II |
| 13755 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen21554II |
| 13760 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3160 | hydrolase | |||
| 3165 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen21554DcmP |
| 3170 | V | V.StyTDcmP (100% identity) | V.Sen21554DcmP | |
| 3175 | multidrug DMT transporter | |||
| 7210 | pseudogene | |||
| 7220 | M | M.Sen943ORFDP (100% identity) | GATC | M.Sen21554ORF7220P |
| 7225 | replication protein | |||
| 18825 | cell division protein DamX | |||
| ??? | M | M.Sen17509DamP (100% identity) | GATC | M.Sen21554DamP |
| 18835 | ribulose-phosphate 3-epimerase | |||
| 19305 | membrane protein | |||
| 19310 | M | M.StyUK1III (99% identity) | ATGCAT | M.Sen21554III |
| 19315 | Fis family transcriptional regulator | |||
| 22570 | 77 aa hypothetical protein | |||
| ??? | M | M.Sen943ORFEP (100% identity) | GATC | M.Sen21554ORFAP |
| 22585 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11530 | cytochrome D ubiquinol oxidase subunit I | |||
| 11535 | R | Ssp6947IIP (99% identity) | CAGAG | Sen21554IP |
| 11540 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen21554I |
| 11545 | pseudogene | |||