Haemophilus parasuis ST4-1 |
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Putative Haemophilus parasuis ST4-1 RM systems
Ref: Lawrence,P.K. et al. Genome Announc 2 (5), e00884-14 (2014)
REBASE ref # 18261
GenBank #: JJNQ00000000
REBASE acronym: HpaST41
Org_num: 13921
All begin HPS41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5195 | R | Hpa906ORF3080P (98% identity) | HpaST41ORF5205P | |
| ??? | S | S1.Gpa29755ORF4430P (99% identity) | S1.HpaST41ORF5205P | |
| ??? | S | S3.LgaPa2ORF3430P (41% identity) | S2.HpaST41ORF5205P | |
| 5205 | M | M.Gpa29755ORF4430P (99% identity) | M.HpaST41ORF5205P | |
| 5215 | RNA polymerase sigma factor RpoE | |||
| 935 | R | Hpa906ORF4795P (99% identity) | HpaST41ORF935P | |
| 940 | aspartate aminotransferase | |||
| 7290 | 137 aa hypothetical protein | |||
| 7300 | M | M.Hpa906ORF11530P (100% identity) | M.HpaST41ORF7300P | |
| 7305 | pseudogene | |||
| 7310 | S | S2.Gpa412ORF11990P (99% identity) | S1.HpaST41ORF7300P | |
| 7315 | S | S2.GpaXP11ORF9310P (97% identity) | S2.HpaST41ORF7300P | |
| 7320 | 255 aa hypothetical protein | |||
| 7325 | 148 aa hypothetical protein | |||
| 7330 | R | HpaNagORF1802P (99% identity) | HpaST41ORF7300P | |
| 7335 | 71 aa hypothetical protein | |||
| 7120 | 106 aa hypothetical protein | |||
| 7125 | S | S.GpaXP11ORF8450P (99% identity) | S.HpaST41ORF7145P | |
| 7130 | R | Hpa906ORF10680P (99% identity) | HpaST41ORF7145P | |
| 7135 | 392 aa hypothetical protein | |||
| 7140 | 86 aa hypothetical protein | |||
| 7145 | M | M.Hpa318ORF7140P (100% identity) | M.HpaST41ORF7145P | |
| 7150 | 16S rRNA methyltransferase | |||
| 2405 | MFS transporter | |||
| 2410 | M | M.HpaSH03ORF4290P (79% identity) | M.HpaST41ORF2410P | |
| 2415 | S | S.HpaSH03ORF4290P (99% identity) | S.HpaST41ORF2410P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7110 | M | M.Gpa4557ORF725P (95% identity) | BA | M.HpaST41ORF7110P |
| 7115 | 86 aa hypothetical protein | |||
| 4900 | aspartate-semialdehyde dehydrogenase | |||
| 4905 | M | HpaSHORF963P (97% identity) | M.HpaST41ORF4905P | |
| 4910 | 63 aa hypothetical protein | |||
| 8895 | lactate dehydrogenase | |||
| 8900 | R | HpaSHORF2119P (100% identity) | CGCG | HpaST41ORF8905P |
| 8905 | M | M.HpaSHORF2119P (100% identity) | CGCG | M.HpaST41ORF8905P |
| 8910 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate | |||
| 9760 | 86 aa hypothetical protein | |||
| 9765 | M | M.GpaHPS1ORF2210P (98% identity) | M.HpaST41ORF9765P | |
| 9770 | enoyl-CoA hydratase | |||
| 8030 | transporter | |||
| 8035 | M | M.HpaSH03ORF6215P (100% identity) | GATC | M.HpaST41ORF8035P |
| 8040 | 3-dehydroquinate synthase | |||
| 7940 | condesin subunit E | |||
| 7945 | M | M.HpaNagORF227P (99% identity) | CCGG | M.HpaST41ORF7945P |
| 7950 | 199 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1095 | XRE family transcriptional regulator | |||
| 1100 | M | M.HpaNagORF1410P (100% identity) | M.HpaST41ORF1100P | |
| 1105 | R | HpaNagORF1410P (100% identity) | HpaST41ORF1100P | |
| 1110 | transposase | |||
| 5840 | addiction module protein | |||
| 5845 | R | GpaHPS1ORF10310P (99% identity) | HpaST41ORF5850P | |
| ??? | M | M.GpaH80ORF8730BP (60% identity) | M1.HpaST41ORF5850P | |
| ??? | M | M.GpaXP11ORF10010P (41% identity) | M2.HpaST41ORF5850P | |
| 5855 | ketol-acid reductoisomerase | |||